ENSLACG00000017771 (Latimeria chalumnae)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSLACG00000017771 T313567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		0.988 0.988
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000020220 Pipsqueak 202 239
ENSLACP00000020220 Pipsqueak 452 497
ENSLACP00000022820 Pipsqueak 257 294
ENSLACP00000022820 Pipsqueak 507 552

Links

Other Pipsqueak family TFs
Other Latimeria chalumnae TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HNF1A Homo sapiens ENSG00000135100 D 0.000
HMBOX1 Homo sapiens ENSG00000147421 D 0.000
HNF1B Homo sapiens ENSG00000275410 D 0.000
Hnf1b Mus musculus ENSMUSG00000020679 D 0.000
Hmbox1 Mus musculus ENSMUSG00000021972 D 0.000
Hnf1a Mus musculus ENSMUSG00000029556 D 0.000
CapteG124171 Capitella teleta CapteG124171 I 0.000
HNF1B Anolis carolinensis ENSACAG00000006458 I 0.000
HMBOX1 Anolis carolinensis ENSACAG00000010160 I 0.000
ENSAMEG00000008387 Ailuropoda melanoleuca ENSAMEG00000008387 I 0.000
ENSAMEG00000013125 Ailuropoda melanoleuca ENSAMEG00000013125 I 0.000
ENSAMEG00000016028 Ailuropoda melanoleuca ENSAMEG00000016028 I 0.000
ENSAMXG00000004039 Astyanax mexicanus ENSAMXG00000004039 I 0.000
ENSAMXG00000005661 Astyanax mexicanus ENSAMXG00000005661 I 0.000
ENSAMXG00000011241 Astyanax mexicanus ENSAMXG00000011241 I 0.000
ENSAMXG00000018539 Astyanax mexicanus ENSAMXG00000018539 I 0.000
ENSAMXG00000024376 Astyanax mexicanus ENSAMXG00000024376 I 0.000
ENSAPLG00000002580 Anas platyrhynchos ENSAPLG00000002580 I 0.000
ENSAPLG00000006003 Anas platyrhynchos ENSAPLG00000006003 I 0.000
HNF1B Bos taurus ENSBTAG00000004710 I 0.000
HMBOX1 Bos taurus ENSBTAG00000010819 I 0.000
HNF1A Bos taurus ENSBTAG00000021795 I 0.000
HMBOX1 Canis familiaris ENSCAFG00000008237 I 0.000
HNF1A Canis familiaris ENSCAFG00000010502 I 0.000
HNF1B Canis familiaris ENSCAFG00000018150 I 0.000
HMBOX1 Choloepus hoffmanni ENSCHOG00000005538 I 0.000
HNF1B Choloepus hoffmanni ENSCHOG00000006010 I 0.000
ENSCING00000007645 Ciona intestinalis ENSCING00000007645 I 0.000
HNF1B Callithrix jacchus ENSCJAG00000015174 I 0.000
HMBOX1 Callithrix jacchus ENSCJAG00000015654 I 0.000
HNF1B Cavia porcellus ENSCPOG00000001234 I 0.000
HNF1A Cavia porcellus ENSCPOG00000007242 I 0.000
HMBOX1 Cavia porcellus ENSCPOG00000011124 I 0.000
ENSCSAG00000002227 Chlorocebus sabaeus ENSCSAG00000002227 I 0.000
ENSCSAG00000006125 Chlorocebus sabaeus ENSCSAG00000006125 I 0.000
ENSCSAG00000015894 Chlorocebus sabaeus ENSCSAG00000015894 I 0.000
ENSCSAVG00000009827 Ciona savignyi ENSCSAVG00000009827 I 0.000
hnf1ba Danio rerio ENSDARG00000006615 I 0.000
hnf1a Danio rerio ENSDARG00000009470 I 0.000
hmbox1b Danio rerio ENSDARG00000018913 I 0.000
hnf1bb Danio rerio ENSDARG00000022295 I 0.000
hmbox1a Danio rerio ENSDARG00000027082 I 0.000
zgc:91944 Danio rerio ENSDARG00000035887 I 0.000
HNF1A Dasypus novemcinctus ENSDNOG00000000374 I 0.000
HNF1B Dasypus novemcinctus ENSDNOG00000001586 I 0.000
HMBOX1 Dasypus novemcinctus ENSDNOG00000031840 I 0.000
Hnf1b Dipodomys ordii ENSDORG00000009669 I 0.000
HMBOX1 Equus caballus ENSECAG00000008240 I 0.000
HNF1B Equus caballus ENSECAG00000015854 I 0.000
HNF1A Equus caballus ENSECAG00000019954 I 0.000
HNF1B Erinaceus europaeus ENSEEUG00000004998 I 0.000
ENSFALG00000005101 Ficedula albicollis ENSFALG00000005101 I 0.000
ENSFALG00000007499 Ficedula albicollis ENSFALG00000007499 I 0.000
ENSFALG00000010859 Ficedula albicollis ENSFALG00000010859 I 0.000
HNF1B Felis catus ENSFCAG00000000241 I 0.000
HNF1A Felis catus ENSFCAG00000009638 I 0.000
HMBOX1 Felis catus ENSFCAG00000022672 I 0.000
hmbox1b Gasterosteus aculeatus ENSGACG00000004391 I 0.000
zgc:91944 Gasterosteus aculeatus ENSGACG00000009223 I 0.000
hnf1ba Gasterosteus aculeatus ENSGACG00000011101 I 0.000
hnf1a Gasterosteus aculeatus ENSGACG00000012691 I 0.000
HNF1B Gallus gallus ENSGALG00000005504 I 0.000
HNF1A Gallus gallus ENSGALG00000006968 I 0.000
HMBOX1 Gallus gallus ENSGALG00000016633 I 0.000
HMBOX1 Gorilla gorilla ENSGGOG00000000860 I 0.000
HNF1A Gorilla gorilla ENSGGOG00000004329 I 0.000
HNF1B Gorilla gorilla ENSGGOG00000006322 I 0.000
ENSGMOG00000001038 Gadus morhua ENSGMOG00000001038 I 0.000
ENSGMOG00000002742 Gadus morhua ENSGMOG00000002742 I 0.000
ENSGMOG00000004622 Gadus morhua ENSGMOG00000004622 I 0.000
ENSGMOG00000006872 Gadus morhua ENSGMOG00000006872 I 0.000
ENSGMOG00000016065 Gadus morhua ENSGMOG00000016065 I 0.000
ENSLACG00000011304 Latimeria chalumnae ENSLACG00000011304 I 0.000
ENSLACG00000012983 Latimeria chalumnae ENSLACG00000012983 I 0.000
ENSLACG00000017915 Latimeria chalumnae ENSLACG00000017915 I 0.000
HNF1B Loxodonta africana ENSLAFG00000002573 I 0.000
HNF1A Loxodonta africana ENSLAFG00000017872 I 0.000
HMBOX1 Loxodonta africana ENSLAFG00000032318 I 0.000
ENSLOCG00000001916 Lepisosteus oculatus ENSLOCG00000001916 I 0.000
ENSLOCG00000002874 Lepisosteus oculatus ENSLOCG00000002874 I 0.000
ENSLOCG00000005942 Lepisosteus oculatus ENSLOCG00000005942 I 0.000
ENSLOCG00000015994 Lepisosteus oculatus ENSLOCG00000015994 I 0.000
ENSMEUG00000004163 Macropus eugenii ENSMEUG00000004163 I 0.000
ENSMEUG00000015023 Macropus eugenii ENSMEUG00000015023 I 0.000
HNF1B Meleagris gallopavo ENSMGAG00000008126 I 0.000
HNF1A Meleagris gallopavo ENSMGAG00000008538 I 0.000
HMBOX1 Myotis lucifugus ENSMLUG00000007478 I 0.000
HNF1A Myotis lucifugus ENSMLUG00000009109 I 0.000
HNF1B Myotis lucifugus ENSMLUG00000012260 I 0.000
HNF1B Macaca mulatta ENSMMUG00000003431 I 0.000
HMBOX1 Macaca mulatta ENSMMUG00000014981 I 0.000
HNF1A Monodelphis domestica ENSMODG00000002966 I 0.000
HMBOX1 Monodelphis domestica ENSMODG00000008788 I 0.000
HNF1B Monodelphis domestica ENSMODG00000019108 I 0.000
ENSMPUG00000001070 Mustela putorius furo ENSMPUG00000001070 I 0.000
ENSMPUG00000003290 Mustela putorius furo ENSMPUG00000003290 I 0.000
ENSMPUG00000015004 Mustela putorius furo ENSMPUG00000015004 I 0.000
ENSNLEG00000002919 Nomascus leucogenys ENSNLEG00000002919 I 0.000
ENSNLEG00000016701 Nomascus leucogenys ENSNLEG00000016701 I 0.000
HNF1A Ornithorhynchus anatinus ENSOANG00000014646 I 0.000
ENSOARG00000003338 Ovis aries ENSOARG00000003338 I 0.000
ENSOARG00000013764 Ovis aries ENSOARG00000013764 I 0.000
ENSOARG00000015036 Ovis aries ENSOARG00000015036 I 0.000
HNF1B Oryctolagus cuniculus ENSOCUG00000003682 I 0.000
HMBOX1 Oryctolagus cuniculus ENSOCUG00000017211 I 0.000
HNF1B Otolemur garnettii ENSOGAG00000000869 I 0.000
HMBOX1 Otolemur garnettii ENSOGAG00000001381 I 0.000
HNF1A Otolemur garnettii ENSOGAG00000009071 I 0.000
ENSONIG00000001328 Oreochromis niloticus ENSONIG00000001328 I 0.000
ENSONIG00000007704 Oreochromis niloticus ENSONIG00000007704 I 0.000
ENSONIG00000011178 Oreochromis niloticus ENSONIG00000011178 I 0.000
ENSONIG00000013161 Oreochromis niloticus ENSONIG00000013161 I 0.000
HNF1A Ochotona princeps ENSOPRG00000001671 I 0.000
HNF1B Ochotona princeps ENSOPRG00000003933 I 0.000
hnf1ba Oryzias latipes ENSORLG00000004564 I 0.000
hmbox1b Oryzias latipes ENSORLG00000016242 I 0.000
ENSORLG00000018971 Oryzias latipes ENSORLG00000018971 I 0.000
zgc:91944 Oryzias latipes ENSORLG00000020883 I 0.000
ENSPANG00000008728 Papio anubis ENSPANG00000008728 I 0.000
ENSPANG00000014537 Papio anubis ENSPANG00000014537 I 0.000
ENSPANG00000022102 Papio anubis ENSPANG00000022102 I 0.000
HNF1B Procavia capensis ENSPCAG00000008147 I 0.000
HMBOX1 Procavia capensis ENSPCAG00000012005 I 0.000
ENSPFOG00000000843 Poecilia formosa ENSPFOG00000000843 I 0.000
ENSPFOG00000009496 Poecilia formosa ENSPFOG00000009496 I 0.000
ENSPFOG00000012263 Poecilia formosa ENSPFOG00000012263 I 0.000
ENSPFOG00000013053 Poecilia formosa ENSPFOG00000013053 I 0.000
ENSPPYG00000008222 Pongo abelii ENSPPYG00000008222 I 0.000
ENSPPYG00000018480 Pongo abelii ENSPPYG00000018480 I 0.000
ENSPSIG00000009511 Pelodiscus sinensis ENSPSIG00000009511 I 0.000
ENSPSIG00000013055 Pelodiscus sinensis ENSPSIG00000013055 I 0.000
ENSPSIG00000016826 Pelodiscus sinensis ENSPSIG00000016826 I 0.000
HNF1A Pan troglodytes ENSPTRG00000005551 I 0.000
HNF1B Pan troglodytes ENSPTRG00000009059 I 0.000
HMBOX1 Pan troglodytes ENSPTRG00000020127 I 0.000
HNF1A Pteropus vampyrus ENSPVAG00000008044 I 0.000
HNF1B Pteropus vampyrus ENSPVAG00000010466 I 0.000
Hnf1a Rattus norvegicus ENSRNOG00000001183 I 0.000
Hnf1b Rattus norvegicus ENSRNOG00000002598 I 0.000
Hmbox1 Rattus norvegicus ENSRNOG00000013326 I 0.000
HNF1B Sorex araneus ENSSARG00000007152 I 0.000
ENSSHAG00000005052 Sarcophilus harrisii ENSSHAG00000005052 I 0.000
ENSSHAG00000016211 Sarcophilus harrisii ENSSHAG00000016211 I 0.000
HMBOX1 Sus scrofa ENSSSCG00000009682 I 0.000
HNF1A Sus scrofa ENSSSCG00000009919 I 0.000
HNF1B Sus scrofa ENSSSCG00000022417 I 0.000
ENSSTOG00000004719 Ictidomys tridecemlineatus ENSSTOG00000004719 I 0.000
ENSSTOG00000012440 Ictidomys tridecemlineatus ENSSTOG00000012440 I 0.000
HNF1A Taeniopygia guttata ENSTGUG00000009673 I 0.000
HMBOX1 Taeniopygia guttata ENSTGUG00000013324 I 0.000
hnf1a Tetraodon nigroviridis ENSTNIG00000011468 I 0.000
zgc:91944 Tetraodon nigroviridis ENSTNIG00000014025 I 0.000
hnf1ba Tetraodon nigroviridis ENSTNIG00000016225 I 0.000
hnf1ba Takifugu rubripes ENSTRUG00000003809 I 0.000
hmbox1b Takifugu rubripes ENSTRUG00000004378 I 0.000
zgc:91944 Takifugu rubripes ENSTRUG00000012550 I 0.000
hnf1a Takifugu rubripes ENSTRUG00000016222 I 0.000
ENSTSYG00000001109 Tarsius syrichta ENSTSYG00000001109 I 0.000
ENSTSYG00000010701 Tarsius syrichta ENSTSYG00000010701 I 0.000
HMBOX1 Tursiops truncatus ENSTTRG00000015467 I 0.000
HNF1B Tursiops truncatus ENSTTRG00000015910 I 0.000
ENSXMAG00000001795 Xiphophorus maculatus ENSXMAG00000001795 I 0.000
ENSXMAG00000003472 Xiphophorus maculatus ENSXMAG00000003472 I 0.000
ENSXMAG00000005730 Xiphophorus maculatus ENSXMAG00000005730 I 0.000
ENSXMAG00000011775 Xiphophorus maculatus ENSXMAG00000011775 I 0.000
HelroG166133 Helobdella robusta HelroG166133 I 0.000
SPU_002791 Strongylocentrotus purpuratus SPU_002791 I 0.000
SPU_010305 Strongylocentrotus purpuratus SPU_010305 I 0.000
SPU_022737 Strongylocentrotus purpuratus SPU_022737 I 0.000
TriadG28952 Trichoplax adhaerens TriadG28952 I 0.000
Aan_R008292 Calypte anna Aan_R008292 I 0.000
Aan_R010756 Calypte anna Aan_R010756 I 0.000
Aan_R014136 Calypte anna Aan_R014136 I 0.000
Afo_R009049 Aptenodytes forsteri Afo_R009049 I 0.000
Afo_R011837 Aptenodytes forsteri Afo_R011837 I 0.000
Afo_R013605 Aptenodytes forsteri Afo_R013605 I 0.000
Alligator_sinensis_CCG002074.1 Alligator sinensis Alligator_sinensis_CCG002074.1 I 0.000
Alligator_sinensis_CCG014136.1 Alligator sinensis Alligator_sinensis_CCG014136.1 I 0.000
Brh_R011090 Buceros rhinoceros Brh_R011090 I 0.000
Brh_R012838 Buceros rhinoceros Brh_R012838 I 0.000
Cmyd_10005161 Chelonia mydas Cmyd_10005161 I 0.000
Cmyd_10005786 Chelonia mydas Cmyd_10005786 I 0.000
Cmyd_10016186 Chelonia mydas Cmyd_10016186 I 0.000
ENSBTAP00000006184-D1 Bos grunniens ENSBTAP00000006184-D1 I 0.000
ENSBTAP00000029049-D1 Bos grunniens ENSBTAP00000029049-D1 I 0.000
ENSP00000225893 Macaca fascicularis ENSP00000225893 I 0.000
ENSP00000257555 Macaca fascicularis ENSP00000257555 I 0.000
ENSP00000401769-D1 Bos grunniens ENSP00000401769-D1 I 0.000
ENSP00000401769 Macaca fascicularis ENSP00000401769 I 0.000
Gfo_R008926 Geospiza fortis Gfo_R008926 I 0.000
Gfo_R010877 Geospiza fortis Gfo_R010877 I 0.000
Gfo_R012758 Geospiza fortis Gfo_R012758 I 0.000
Myotis_brandtii_HMBOX1_10012332 Myotis brandtii Myotis_brandtii_HMBOX1_10012332 I 0.000
Myotis_brandtii_HNF1A_10028127 Myotis brandtii Myotis_brandtii_HNF1A_10028127 I 0.000
Myotis_brandtii_HNF1B_10031016 Myotis brandtii Myotis_brandtii_HNF1B_10031016 I 0.000
Ogr03456 Ophisaurus gracilis Ogr03456 I 0.000
Pvit_03697 Pogona vitticeps Pvit_03697 I 0.000
Pvit_13545 Pogona vitticeps Pvit_13545 I 0.000
Tal_R010417 Tyto alba Tal_R010417 I 0.000
fgenesh2_kg.scaffold_157000001 Branchiostoma floridae fgenesh2_kg.scaffold_157000001 I 0.000
fgenesh2_kg.scaffold_214000001 Branchiostoma floridae fgenesh2_kg.scaffold_214000001 I 0.000
Sakowv30011728m.g Saccoglossus kowalevskii Sakowv30011728m.g I 0.000
SNAPOd2T00002150001 Oikopleura dioica SNAPOd2T00002150001 I 0.000
hnf1b.S Xenopus laevis XB-GENE-17330995 I 0.000
hnf1a Xenopus tropicalis XB-GENE-484117 I 0.000
hnf1b Xenopus tropicalis XB-GENE-485652 I 0.000
hnf1b.L Xenopus laevis XB-GENE-485656 I 0.000
hmbox1.S Xenopus laevis XB-GENE-6078482 I 0.000
hnf1a.S Xenopus laevis XB-GENE-865049 I 0.000
XP_002939680 Xenopus tropicalis XP_002939680 I 0.000