LCORL (Sus scrofa)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSSSCG00000008748 T313618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000009324 Pipsqueak 278 315
ENSSSCP00000009324 Pipsqueak 527 572

Links

Other Pipsqueak family TFs
Other Sus scrofa TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AEL327W Ashbya gossypii AGOS_AEL327W D 0.000
FHL1 Saccharomyces cerevisiae YPR104C D 0.000
KLLA0_F08206g Kluyveromyces lactis KLLA0_F08206g D 0.000
SAKL0B09284g Lachancea kluyveri SAKL0B09284g I 0.000
Kwal_7268 Kluyveromyces waltii Kwal_7268 I 0.000
KLTH0D03036g Kluyveromyces thermotolerans KLTH0D03036g I 0.000
25921_YPR104C Saccharomyces bayanus 25921_YPR104C I 0.000
23064_YPR104C Saccharomyces paradoxus 23064_YPR104C I 0.000
AACERI_AaceriAEL327W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL327W I 0.000
22632_Multiple Saccharomyces mikatae 22632_Multiple I 0.000
Scas_Contig705.31 Saccharomyces castellii Scas_Contig705.31 I 0.000
ZYRO0C17710g Zygosaccharomyces rouxii ZYRO0C17710g I 0.000
ZBAI_05606 Zygosaccharomyces bailii ZBAI_05606 I 0.000
XP_002494105.1 Pichia pastoris XP_002494105.1 I 0.000
TPHA_0M01760 Tetrapisispora phaffii TPHA_0M01760 I 0.000
TDEL_0C05550 Torulaspora delbrueckii TDEL_0C05550 I 0.000
TBLA_0C02390 Tetrapisispora blattae TBLA_0C02390 I 0.000
SKUD_169306 Saccharomyces kudriavzevii SKUD_169306 I 0.000
PAS_chr4_0980 Komagataella pastoris PAS_chr4_0980 I 0.000
NDAI_0A04850 Naumovozyma dairenensis NDAI_0A04850 I 0.000
NCAS_0A11450 Naumovozyma castellii NCAS_0A11450 I 0.000
LALA0_S08e07316g Lachancea lanzarotensis LALA0_S08e07316g I 0.000
KUCA_T00003332001 Kuraishia capsulata KUCA_T00003332001 I 0.000
Kpol_1018p143 Vanderwaltozyma polyspora Kpol_1018p143 I 0.000
KNAG_0A07530 Kazachstania naganishii KNAG_0A07530 I 0.000
KLTH0D03036g Lachancea thermotolerans KLTH0D03036g I 0.000
KAFR_0D04220 Kazachstania africana KAFR_0D04220 I 0.000
JL09_g4297 Pichia kudriavzevii JL09_g4297 I 0.000
HPODL_04343 Ogataea parapolymorpha HPODL_04343 I 0.000
Ecym_2615 Eremothecium cymbalariae Ecym_2615 I 0.000
CAGL0G01782g Candida glabrata CAGL0G01782g I 0.000
BN7_771 Wickerhamomyces ciferrii BN7_771 I 0.000