CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GF11582
(
Drosophila ananassae
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
FBgn0088622
T313664_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rib
M03950_2.00
Drosophila melanogaster
YNKTGCRAWT
AWTYGCAMNR
SELEX
Nitta et al.(2015)
rib_1
1.000
1.000
rib
M06439_2.00
Drosophila melanogaster
YGCRAAAWW
WWTTTYGCR
B1H
Zhu et al.(2011)
rib_SANGER_5_FBgn0003254
1.000
1.000
For this family, TFs with SR scores >
0.778
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0114774
Pipsqueak
493
537
TRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGR
Links
Other
Pipsqueak
family TFs
Other
Drosophila ananassae
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L893_g2755
Steinernema glaseri
L893_g2755
N