maker-pir_contig_232-snap-gene-0.11 (Pythium irregulare)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 maker-pir_contig_232-snap-gene-0.11 T313881_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000017456 Pipsqueak 59 102
EPrPI00000017456 Pipsqueak 291 333

Links

Other Pipsqueak family TFs
Other Pythium irregulare TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0012s07130 Populus trichocarpa POPTR_0012s07130 N
29736.m002007 Ricinus communis 29736.m002007 N
30147.m014102 Ricinus communis 30147.m014102 N
cassava19730.m1 Manihot esculenta cassava19730.m1 N
cassava35143.m1 Manihot esculenta cassava35143.m1 N
Cucsa.097840 Cucumis sativus Cucsa.097840 N
Eucgr.B03420 Eucalyptus grandis Eucgr.B03420 N
Eucgr.K02464 Eucalyptus grandis Eucgr.K02464 N
Gorai.003G095400 Gossypium raimondii Gorai.003G095400 N
SapurV1A.0481s0010 Salix purpurea SapurV1A.0481s0010 N
SapurV1A.1256s0050 Salix purpurea SapurV1A.1256s0050 N