CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava19730.m1
(
Manihot esculenta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
cassava19730.m1
T047974_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava19730.m1
bHLH
19
60
DQILDLVTKLQQLLPEIGNRRSDKVSAAKVLQETCNYIRSLH
Links
Other
bHLH
family TFs
Other
Manihot esculenta
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0012s07130
Populus trichocarpa
POPTR_0012s07130
N
0.914
30147.m014102
Ricinus communis
30147.m014102
N
0.914
Eucgr.K02464
Eucalyptus grandis
Eucgr.K02464
N
0.914
SapurV1A.0366s0010
Salix purpurea
SapurV1A.0366s0010
N
0.914
SapurV1A.0481s0010
Salix purpurea
SapurV1A.0481s0010
N
0.914
cassava35143.m1
Manihot esculenta
cassava35143.m1
N
0.886
SapurV1A.1256s0050
Salix purpurea
SapurV1A.1256s0050
N
0.867
Cucsa.097840
Cucumis sativus
Cucsa.097840
N
0.862
29736.m002007
Ricinus communis
29736.m002007
N
0.854
Eucgr.B03420
Eucalyptus grandis
Eucgr.B03420
N
0.854
Gorai.003G095400
Gossypium raimondii
Gorai.003G095400
N
0.839