PITG_11246 (Phytophthora infestans)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 PITG_11246 T314022_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra78816
M02437_2.00 		Phytophthora ramorum
NNYRNWACAN
NTGTWNYRNN		 PBM
Weirauch et al.(2014)
pTH7817 		0.900 0.900
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PITG_11246T0 Pipsqueak 275 315

Links

Other Pipsqueak family TFs
Other Phytophthora infestans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_07521 Verticillium albo atrum VDBG_07521 N
BBA_02538 Beauveria bassiana BBA_02538 N
CCM_03209 Cordyceps militaris CCM_03209 N
PODANS_2_5220 Podospora anserina PODANS_2_5220 N
SAPIO_CDS4058 Scedosporium apiospermum SAPIO_CDS4058 N
SMAC_07029 Sordaria macrospora SMAC_07029 N
TRIATDRAFT_77763 Trichoderma atroviride TRIATDRAFT_77763 N
VDAG_09242 Verticillium dahliae VDAG_09242 N
VDBG_07521 Verticillium alfalfae VDBG_07521 N
estExt_Genewise1Plus.C_11946 Neurospora discreta estExt_Genewise1Plus.C_11946 N
NCU01461 Neurospora crassa NCU01461 N