XP_002166469.1 (Hydra magnipapillata)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 XP_002166469.1 T314805_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002166469.1 Pipsqueak 16 57

Links

Other Pipsqueak family TFs
Other Hydra magnipapillata TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KNAT6 Arabidopsis thaliana AT1G23380 D
GRMZM2G087741 Zea mays GRMZM2G087741 D
GRMZM2G135447 Zea mays GRMZM2G135447 D
KNOX3_HORVU Hordeum vulgare KNOX3_HORVU D
PK25034.1 Cannabis sativa PK25034.1 D
AMTR_s00085p00165180 Amborella trichopoda AMTR_s00085p00165180 I
AMTR_s00123p00122830 Amborella trichopoda AMTR_s00123p00122830 I
STM Arabidopsis thaliana AT1G62360 I
KNAT2 Arabidopsis thaliana AT1G70510 I
KNAT1 Arabidopsis thaliana AT4G08150 I
BGIOSGA003338 Oryza indica BGIOSGA003338 I
BGIOSGA009878 Oryza indica BGIOSGA009878 I
BGIOSGA013637 Oryza indica BGIOSGA013637 I
OSH71 Oryza indica BGIOSGA018883 I
OSH15 Oryza indica BGIOSGA025091 I
Bo01061s030 Brassica oleracea Bo01061s030 I
Bo2g068250 Brassica oleracea Bo2g068250 I
Bo3g043050 Brassica oleracea Bo3g043050 I
Bo5g039530 Brassica oleracea Bo5g039530 I
Bo8g073790 Brassica oleracea Bo8g073790 I
Bo9g037420 Brassica oleracea Bo9g037420 I
Bra000638 Brassica rapa Bra000638 I
Bra007920 Brassica rapa Bra007920 I
Bra016348 Brassica rapa Bra016348 I
Bra024591 Brassica rapa Bra024591 I
Bra027050 Brassica rapa Bra027050 I
BRADI1G07247 Brachypodium distachyon BRADI1G07247 I
BRADI1G12677 Brachypodium distachyon BRADI1G12677 I
BRADI1G57607 Brachypodium distachyon BRADI1G57607 I
BRADI2G11540 Brachypodium distachyon BRADI2G11540 I
BRADI2G38390 Brachypodium distachyon BRADI2G38390 I
F775_05292 Aegilops tauschii F775_05292 I
F775_14143 Aegilops tauschii F775_14143 I
F775_31062 Aegilops tauschii F775_31062 I
F775_31450 Aegilops tauschii F775_31450 I
STM Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000245 I
KNAT6 Arabidopsis lyrata fgenesh2_kg.1__2553__AT1G23380.2 I
KNAT2 Arabidopsis lyrata fgenesh2_kg.2__1305__AT1G70510.1 I
KNAT1 Arabidopsis lyrata fgenesh2_kg.6__2861__AT4G08150.1 I
GLYMA0041S00360 Glycine max GLYMA0041S00360 I
GLYMA01G03450 Glycine max GLYMA01G03450 I
GLYMA02G04190 Glycine max GLYMA02G04190 I
GLYMA04G35850 Glycine max GLYMA04G35850 I
GLYMA07G39350 Glycine max GLYMA07G39350 I
GLYMA08G39170 Glycine max GLYMA08G39170 I
GLYMA09G01000 Glycine max GLYMA09G01000 I
GLYMA10G28820 Glycine max GLYMA10G28820 I
GLYMA14G10430 Glycine max GLYMA14G10430 I
GLYMA15G11850 Glycine max GLYMA15G11850 I
GLYMA17G01370 Glycine max GLYMA17G01370 I
GLYMA18G20293 Glycine max GLYMA18G20293 I
GLYMA19G41610 Glycine max GLYMA19G41610 I
GLYMA20G22986 Glycine max GLYMA20G22986 I
GRMZM2G017087 Zea mays GRMZM2G017087 I
GRMZM2G028041 Zea mays GRMZM2G028041 I
GRMZM2G094241 Zea mays GRMZM2G094241 I
GRMZM2G452178 Zea mays GRMZM2G452178 I
GRMZM5G832409 Zea mays GRMZM5G832409 I
GSMUA_Achr10G28700_001 Musa acuminata GSMUA_Achr10G28700_001 I
GSMUA_Achr1G03660_001 Musa acuminata GSMUA_Achr1G03660_001 I
GSMUA_Achr2G13200_001 Musa acuminata GSMUA_Achr2G13200_001 I
GSMUA_Achr3G26230_001 Musa acuminata GSMUA_Achr3G26230_001 I
GSMUA_Achr4G03120_001 Musa acuminata GSMUA_Achr4G03120_001 I
GSMUA_Achr4G14600_001 Musa acuminata GSMUA_Achr4G14600_001 I
GSMUA_Achr4G28270_001 Musa acuminata GSMUA_Achr4G28270_001 I
GSMUA_Achr5G01960_001 Musa acuminata GSMUA_Achr5G01960_001 I
GSMUA_Achr6G04640_001 Musa acuminata GSMUA_Achr6G04640_001 I
GSMUA_Achr7G08050_001 Musa acuminata GSMUA_Achr7G08050_001 I
GSMUA_Achr7G27540_001 Musa acuminata GSMUA_Achr7G27540_001 I
LPERR01G11670 Leersia perrieri LPERR01G11670 I
LPERR03G27340 Leersia perrieri LPERR03G27340 I
LPERR03G29990 Leersia perrieri LPERR03G29990 I
LPERR05G01890 Leersia perrieri LPERR05G01890 I
LPERR07G01870 Leersia perrieri LPERR07G01870 I
MLOC_11678 Hordeum vulgare MLOC_11678 I
MLOC_57232 Hordeum vulgare MLOC_57232 I
MTR_1g017080 Medicago truncatula MTR_1g017080 I
MTR_1g084060 Medicago truncatula MTR_1g084060 I
MTR_2g024390 Medicago truncatula MTR_2g024390 I
MTR_5g033720 Medicago truncatula MTR_5g033720 I
OB01G22470 Oryza brachyantha OB01G22470 I
OB03G11790 Oryza brachyantha OB03G11790 I
OB03G39780 Oryza brachyantha OB03G39780 I
OB07G11590 Oryza brachyantha OB07G11590 I
OBART01G11630 Oryza barthii OBART01G11630 I
OBART03G01840 Oryza barthii OBART03G01840 I
OBART03G32690 Oryza barthii OBART03G32690 I
OBART03G32710 Oryza barthii OBART03G32710 I
OBART05G02090 Oryza barthii OBART05G02090 I
OBART07G01880 Oryza barthii OBART07G01880 I
OGLUM01G14210 Oryza glumaepatula OGLUM01G14210 I
OGLUM03G32330 Oryza glumaepatula OGLUM03G32330 I
OGLUM03G32350 Oryza glumaepatula OGLUM03G32350 I
OGLUM05G02160 Oryza glumaepatula OGLUM05G02160 I
OGLUM07G01740 Oryza glumaepatula OGLUM07G01740 I
OLONG_001151 Oryza longistaminata OLONG_001151 I
OLONG_001153 Oryza longistaminata OLONG_001153 I
OLONG_012157 Oryza longistaminata OLONG_012157 I
OLONG_020200 Oryza longistaminata OLONG_020200 I
OMERI03G29420 Oryza meridionalis OMERI03G29420 I
OMERI03G29440 Oryza meridionalis OMERI03G29440 I
OMERI05G02200 Oryza meridionalis OMERI05G02200 I
OMERI07G01180 Oryza meridionalis OMERI07G01180 I
ONIVA03G01480 Oryza nivara ONIVA03G01480 I
ONIVA03G34200 Oryza nivara ONIVA03G34200 I
ONIVA03G34220 Oryza nivara ONIVA03G34220 I
ONIVA03G37180 Oryza nivara ONIVA03G37180 I
ONIVA05G02030 Oryza nivara ONIVA05G02030 I
ONIVA07G00730 Oryza nivara ONIVA07G00730 I
OPUNC01G12460 Oryza punctata OPUNC01G12460 I
OPUNC03G29850 Oryza punctata OPUNC03G29850 I
OPUNC03G29870 Oryza punctata OPUNC03G29870 I
OPUNC05G01700 Oryza punctata OPUNC05G01700 I
OPUNC07G02410 Oryza punctata OPUNC07G02410 I
ORGLA01G0097800 Oryza glaberrima ORGLA01G0097800 I
ORGLA03G0270100 Oryza glaberrima ORGLA03G0270100 I
ORGLA03G0296100 Oryza glaberrima ORGLA03G0296100 I
ORGLA03G0296300 Oryza glaberrima ORGLA03G0296300 I
ORGLA05G0020500 Oryza glaberrima ORGLA05G0020500 I
ORGLA07G0017300 Oryza glaberrima ORGLA07G0017300 I
ORUFI03G01570 Oryza rufipogon ORUFI03G01570 I
ORUFI03G34060 Oryza rufipogon ORUFI03G34060 I
ORUFI03G34080 Oryza rufipogon ORUFI03G34080 I
ORUFI05G02190 Oryza rufipogon ORUFI05G02190 I
ORUFI07G01770 Oryza rufipogon ORUFI07G01770 I
OSH6 Oryza sativa OS01G0302500 I
OS03G0673000 Oryza sativa OS03G0673000 I
OS03G0727200 Oryza sativa OS03G0727200 I
OSH71 Oryza sativa OS05G0129700 I
OSH15 Oryza sativa OS07G0129700 I
OSTLU_5313 Ostreococcus lucimarinus OSTLU_5313 I
PGSC0003DMG400013493 Solanum tuberosum PGSC0003DMG400013493 I
PGSC0003DMG400016711 Solanum tuberosum PGSC0003DMG400016711 I
POPTR_0002s11400 Populus trichocarpa POPTR_0002s11400 I
POPTR_0004s00650 Populus trichocarpa POPTR_0004s00650 I
POPTR_0008s19290 Populus trichocarpa POPTR_0008s19290 I
POPTR_0010s05340 Populus trichocarpa POPTR_0010s05340 I
POPTR_0011s01590 Populus trichocarpa POPTR_0011s01590 I
POPTR_0012s08900 Populus trichocarpa POPTR_0012s08900 I
POPTR_0015s09040 Populus trichocarpa POPTR_0015s09040 I
PRUPE_ppa008461mg Prunus persica PRUPE_ppa008461mg I
PRUPE_ppa013871mg Prunus persica PRUPE_ppa013871mg I
PRUPE_ppa019852mg Prunus persica PRUPE_ppa019852mg I
Sb01g006790 Sorghum bicolor Sb01g006790 I
Sb01g009460 Sorghum bicolor Sb01g009460 I
Sb01g009480 Sorghum bicolor Sb01g009480 I
Sb02g002200 Sorghum bicolor Sb02g002200 I
Sb03g012480 Sorghum bicolor Sb03g012480 I
Sb09g002520 Sorghum bicolor Sb09g002520 I
SELMODRAFT_159366 Selaginella moellendorffii SELMODRAFT_159366 I
SELMODRAFT_415291 Selaginella moellendorffii SELMODRAFT_415291 I
SELMODRAFT_448401 Selaginella moellendorffii SELMODRAFT_448401 I
SELMODRAFT_451276 Selaginella moellendorffii SELMODRAFT_451276 I
Si003268m.g Setaria italica Si003268m.g I
Si023561m.g Setaria italica Si023561m.g I
Si031454m.g Setaria italica Si031454m.g I
Si036193m.g Setaria italica Si036193m.g I
Si037920m.g Setaria italica Si037920m.g I
Si039908m.g Setaria italica Si039908m.g I
Solyc02g081120.2 Solanum lycopersicum Solyc02g081120.2 I
Solyc05g005090.2 Solanum lycopersicum Solyc05g005090.2 I
TCM_010433 Theobroma cacao TCM_010433 I
TCM_012104 Theobroma cacao TCM_012104 I
TCM_026767 Theobroma cacao TCM_026767 I
TCM_030302 Theobroma cacao TCM_030302 I
TCM_034627 Theobroma cacao TCM_034627 I
Traes_1AS_1B1587F7D Triticum aestivum Traes_1AS_1B1587F7D I
Traes_1BS_2156D66E1 Triticum aestivum Traes_1BS_2156D66E1 I
Traes_1DS_543CC7DC9 Triticum aestivum Traes_1DS_543CC7DC9 I
Traes_2AL_E687AF1BE Triticum aestivum Traes_2AL_E687AF1BE I
Traes_2BL_921BF570C Triticum aestivum Traes_2BL_921BF570C I
Traes_2DL_0D933D88B Triticum aestivum Traes_2DL_0D933D88B I
Traes_4AL_2334B226E Triticum aestivum Traes_4AL_2334B226E I
Traes_5BL_B2792D532 Triticum aestivum Traes_5BL_B2792D532 I
Traes_5DL_5FD3B95C7 Triticum aestivum Traes_5DL_5FD3B95C7 I
TRIUR3_30866 Triticum urartu TRIUR3_30866 I
TRIUR3_34593 Triticum urartu TRIUR3_34593 I
VIT_01s0127g00210 Vitis vinifera VIT_01s0127g00210 I
STM Vitis vinifera VIT_10s0116g00190 I
VIT_12s0059g01190 Vitis vinifera VIT_12s0059g01190 I
VIT_14s0060g01180 Vitis vinifera VIT_14s0060g01180 I
VIT_17s0000g08710 Vitis vinifera VIT_17s0000g08710 I
KNAT1 Vitis vinifera VIT_18s0001g08380 I
Ca_00668 Cicer arietinum Ca_00668 I
Ca_03625 Cicer arietinum Ca_03625 I
Ca_09202 Cicer arietinum Ca_09202 I
Ca_18152 Cicer arietinum Ca_18152 I
Cla010234 Citrullus lanatus Cla010234 I
Cla014651 Citrullus lanatus Cla014651 I
Cla020277 Citrullus lanatus Cla020277 I
Cla021211 Citrullus lanatus Cla021211 I
Cla023003 Citrullus lanatus Cla023003 I
Pm006717 Prunus mume Pm006717 I
Pm006718 Prunus mume Pm006718 I
Pm009705 Prunus mume Pm009705 I
Pm028537 Prunus mume Pm028537 I
29631.m001056 Ricinus communis 29631.m001056 I
29842.m003531 Ricinus communis 29842.m003531 I
30128.m008910 Ricinus communis 30128.m008910 I
30147.m013923 Ricinus communis 30147.m013923 I
30170.m013647 Ricinus communis 30170.m013647 I
cassava17642.valid.m1 Manihot esculenta cassava17642.valid.m1 I
cassava19841.m1 Manihot esculenta cassava19841.m1 I
cassava22394.valid.m1 Manihot esculenta cassava22394.valid.m1 I
cassava23924.valid.m1 Manihot esculenta cassava23924.valid.m1 I
cassava27839.m1 Manihot esculenta cassava27839.m1 I
cassava35932.valid.m1 Manihot esculenta cassava35932.valid.m1 I
cassava7893.valid.m1 Manihot esculenta cassava7893.valid.m1 I
Cucsa.044950 Cucumis sativus Cucsa.044950 I
Cucsa.090630 Cucumis sativus Cucsa.090630 I
Cucsa.353140 Cucumis sativus Cucsa.353140 I
Cucsa.395320 Cucumis sativus Cucsa.395320 I
e_gw1.235.24.1 Physcomitrella patens e_gw1.235.24.1 I
est_orfs.8_8268_4271518:3 Micromonas pusilla est_orfs.8_8268_4271518:3 I
fgenesh1_pm.chr_4_#_82 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_82 I
mgf000149m Mimulus guttatus mgf000149m I
mgf016504m Mimulus guttatus mgf016504m I
mgf017032m Mimulus guttatus mgf017032m I
mgf024741m Mimulus guttatus mgf024741m I
Aquca_002_00078 Aquilegia coerulea Aquca_002_00078 I
Aquca_012_00046 Aquilegia coerulea Aquca_012_00046 I
Aquca_032_00056 Aquilegia coerulea Aquca_032_00056 I
Aquca_133_00021 Aquilegia coerulea Aquca_133_00021 I
Bostr.12659s0199 Boechera stricta Bostr.12659s0199 I
Bostr.22157s0102 Boechera stricta Bostr.22157s0102 I
Bostr.3877s0047 Boechera stricta Bostr.3877s0047 I
Cagra.0077s0011 Capsella grandiflora Cagra.0077s0011 I
Cagra.0605s0071 Capsella grandiflora Cagra.0605s0071 I
Cagra.1777s0019 Capsella grandiflora Cagra.1777s0019 I
Cagra.7524s0001 Capsella grandiflora Cagra.7524s0001 I
Carubv10002748m.g Capsella rubella Carubv10002748m.g I
Carubv10011119m.g Capsella rubella Carubv10011119m.g I
Carubv10022064m.g Capsella rubella Carubv10022064m.g I
Carubv10022235m.g Capsella rubella Carubv10022235m.g I
Ciclev10001508m.g Citrus clementina Ciclev10001508m.g I
Ciclev10001779m.g Citrus clementina Ciclev10001779m.g I
Ciclev10015581m.g Citrus clementina Ciclev10015581m.g I
Ciclev10015818m.g Citrus clementina Ciclev10015818m.g I
Ciclev10022781m.g Citrus clementina Ciclev10022781m.g I
Ciclev10033524m.g Citrus clementina Ciclev10033524m.g I
Eucgr.D01364 Eucalyptus grandis Eucgr.D01364 I
Eucgr.F00106 Eucalyptus grandis Eucgr.F00106 I
Eucgr.H02544 Eucalyptus grandis Eucgr.H02544 I
EuGene.1100010071 Micromonas sp RCC299 EuGene.1100010071 I
evm.TU.supercontig_152.56 Carica papaya evm.TU.supercontig_152.56 I
evm.TU.supercontig_48.162 Carica papaya evm.TU.supercontig_48.162 I
evm.TU.supercontig_69.81 Carica papaya evm.TU.supercontig_69.81 I
gene03606-v1.0-hybrid Fragaria vesca gene03606-v1.0-hybrid I
gene19507-v1.0-hybrid Fragaria vesca gene19507-v1.0-hybrid I
gene32207-v1.0-hybrid Fragaria vesca gene32207-v1.0-hybrid I
Gorai.005G098100 Gossypium raimondii Gorai.005G098100 I
Gorai.005G180500 Gossypium raimondii Gorai.005G180500 I
Gorai.009G181500 Gossypium raimondii Gorai.009G181500 I
Gorai.009G223200 Gossypium raimondii Gorai.009G223200 I
Gorai.009G336900 Gossypium raimondii Gorai.009G336900 I
Gorai.010G029000 Gossypium raimondii Gorai.010G029000 I
Gorai.010G183800 Gossypium raimondii Gorai.010G183800 I
Gorai.011G011700 Gossypium raimondii Gorai.011G011700 I
Lus10007245.g Linum usitatissimum Lus10007245.g I
Lus10013037.g Linum usitatissimum Lus10013037.g I
Lus10028244.g Linum usitatissimum Lus10028244.g I
Lus10029125.g Linum usitatissimum Lus10029125.g I
Lus10030003.g Linum usitatissimum Lus10030003.g I
MDP0000136226 Malus domestica MDP0000136226 I
MDP0000231216 Malus domestica MDP0000231216 I
MDP0000252095 Malus domestica MDP0000252095 I
MDP0000254187 Malus domestica MDP0000254187 I
MDP0000254847 Malus domestica MDP0000254847 I
MDP0000280307 Malus domestica MDP0000280307 I
MDP0000294096 Malus domestica MDP0000294096 I
orange1.1g024428m.g Citrus sinensis orange1.1g024428m.g I
orange1.1g029411m.g Citrus sinensis orange1.1g029411m.g I
orange1.1g038569m.g Citrus sinensis orange1.1g038569m.g I
orange1.1g045160m.g Citrus sinensis orange1.1g045160m.g I
Pavir.Ba03909 Panicum virgatum Pavir.Ba03909 I
Pavir.Bb00225 Panicum virgatum Pavir.Bb00225 I
Pavir.Ca00748 Panicum virgatum Pavir.Ca00748 I
Pavir.Ea00998 Panicum virgatum Pavir.Ea00998 I
Pavir.Eb01302 Panicum virgatum Pavir.Eb01302 I
Pavir.Ia00428 Panicum virgatum Pavir.Ia00428 I
Pavir.Ia00731 Panicum virgatum Pavir.Ia00731 I
Pavir.Ia00733 Panicum virgatum Pavir.Ia00733 I
Pavir.J00864 Panicum virgatum Pavir.J00864 I
Pavir.J02025 Panicum virgatum Pavir.J02025 I
Pavir.J02443 Panicum virgatum Pavir.J02443 I
Pavir.J06042 Panicum virgatum Pavir.J06042 I
Pavir.J30099 Panicum virgatum Pavir.J30099 I
Pavir.J39623 Panicum virgatum Pavir.J39623 I
SapurV1A.0004s0390 Salix purpurea SapurV1A.0004s0390 I
SapurV1A.0067s0070 Salix purpurea SapurV1A.0067s0070 I
SapurV1A.0069s0110 Salix purpurea SapurV1A.0069s0110 I
SapurV1A.0127s0040 Salix purpurea SapurV1A.0127s0040 I
SapurV1A.0449s0300 Salix purpurea SapurV1A.0449s0300 I
SapurV1A.4388s0020 Salix purpurea SapurV1A.4388s0020 I
Thhalv10009009m.g Eutrema salsugineum Thhalv10009009m.g I
Thhalv10019501m.g Eutrema salsugineum Thhalv10019501m.g I
Thhalv10023520m.g Eutrema salsugineum Thhalv10023520m.g I
Thhalv10028724m.g Eutrema salsugineum Thhalv10028724m.g I
PK12151.1 Cannabis sativa PK12151.1 I
PK16587.1 Cannabis sativa PK16587.1 I
PK26828.1 Cannabis sativa PK26828.1 I
chr1.LjT33H07.80.nd Lotus japonicus chr1.LjT33H07.80.nd I
chr4.CM0288.890.nd Lotus japonicus chr4.CM0288.890.nd I
fgenesh1_pg.C_Chr_04.0001000291 Ostreococcus tauri fgenesh1_pg.C_Chr_04.0001000291 I
LjSGA_010170.1 Lotus japonicus LjSGA_010170.1 I
LjSGA_022785.1 Lotus japonicus LjSGA_022785.1 I
LjT03D14.220.nd Lotus japonicus LjT03D14.220.nd I
PDK_20s1308201g001 Phoenix dactylifera PDK_20s1308201g001 I
PDK_20s1334792g001 Phoenix dactylifera PDK_20s1334792g001 I
PDK_20s1688611g001 Phoenix dactylifera PDK_20s1688611g001 I
OB05G12100 Oryza brachyantha OB05G12100 N