GSMUA_Achr1G03660_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr1G03660_001 T219097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.606 0.618
GRMZM2G087741
M02138_2.00 		Zea mays
NNTGACRKCN
NGMYGTCANN		 PBM
Weirauch et al.(2014)
pTH5816 		0.602 0.618
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P03660_001 Homeodomain 218 275

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa009464mg Prunus persica PRUPE_ppa009464mg I 0.824
Pm023742 Prunus mume Pm023742 I 0.824
Cucsa.302660 Cucumis sativus Cucsa.302660 I 0.824
evm.TU.supercontig_29.29 Carica papaya evm.TU.supercontig_29.29 I 0.824
gene32356-v1.0-hybrid Fragaria vesca gene32356-v1.0-hybrid I 0.824
Lus10024485.g Linum usitatissimum Lus10024485.g I 0.824
Pavir.J39623 Panicum virgatum Pavir.J39623 I 0.813
chr1.LjT33H07.80.nd Lotus japonicus chr1.LjT33H07.80.nd I 0.813
Bo01061s030 Brassica oleracea Bo01061s030 I 0.811
OB03G11790 Oryza brachyantha OB03G11790 I 0.811
OBART03G01840 Oryza barthii OBART03G01840 I 0.811
OLONG_020200 Oryza longistaminata OLONG_020200 I 0.811
ONIVA03G01480 Oryza nivara ONIVA03G01480 I 0.811
ORUFI03G01570 Oryza rufipogon ORUFI03G01570 I 0.811
KNAT7 Vitis vinifera VIT_02s0025g04630 I 0.741
PGSC0003DMG400022736 Solanum tuberosum PGSC0003DMG400022736 I 0.740
Solyc08g080120.2 Solanum lycopersicum Solyc08g080120.2 I 0.740
TCM_016150 Theobroma cacao TCM_016150 I 0.740
Cla011684 Citrullus lanatus Cla011684 I 0.740
30190.m011101 Ricinus communis 30190.m011101 I 0.740
cassava30127.valid.m1 Manihot esculenta cassava30127.valid.m1 I 0.740
Gorai.003G163800 Gossypium raimondii Gorai.003G163800 I 0.740
Gorai.004G206600 Gossypium raimondii Gorai.004G206600 I 0.740
MDP0000313776 Malus domestica MDP0000313776 I 0.740
PK02271.1 Cannabis sativa PK02271.1 I 0.740
chr2.CM0304.440.nc Lotus japonicus chr2.CM0304.440.nc I 0.740
mgf002324m Mimulus guttatus mgf002324m I 0.728
OSTLU_5313 Ostreococcus lucimarinus OSTLU_5313 I 0.657
fgenesh1_pg.C_Chr_04.0001000291 Ostreococcus tauri fgenesh1_pg.C_Chr_04.0001000291 I 0.657
fgenesh1_pm.chr_4_#_82 Ostreococcus RCC809 fgenesh1_pm.chr_4_#_82 I 0.648
est_orfs.8_8268_4271518:3 Micromonas pusilla est_orfs.8_8268_4271518:3 I 0.646
SELMODRAFT_159366 Selaginella moellendorffii SELMODRAFT_159366 I 0.641
SELMODRAFT_448401 Selaginella moellendorffii SELMODRAFT_448401 I 0.641
Sb01g009460 Sorghum bicolor Sb01g009460 I 0.634
Si036193m.g Setaria italica Si036193m.g I 0.634
EuGene.1100010071 Micromonas sp RCC299 EuGene.1100010071 I 0.631
OBART03G32690 Oryza barthii OBART03G32690 I 0.626
OGLUM03G32330 Oryza glumaepatula OGLUM03G32330 I 0.626
OMERI03G29420 Oryza meridionalis OMERI03G29420 I 0.626
ONIVA03G34200 Oryza nivara ONIVA03G34200 I 0.626
OPUNC03G29850 Oryza punctata OPUNC03G29850 I 0.626
ORGLA03G0296100 Oryza glaberrima ORGLA03G0296100 I 0.626
ORUFI03G34060 Oryza rufipogon ORUFI03G34060 I 0.626
e_gw1.235.24.1 Physcomitrella patens e_gw1.235.24.1 I 0.622
AMTR_s00123p00122830 Amborella trichopoda AMTR_s00123p00122830 I 0.607
STM Arabidopsis thaliana AT1G62360 I 0.607
Bo9g037420 Brassica oleracea Bo9g037420 I 0.607
Bra027050 Brassica rapa Bra027050 I 0.607
BRADI1G07247 Brachypodium distachyon BRADI1G07247 I 0.607
F775_05292 Aegilops tauschii F775_05292 I 0.607
STM Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000245 I 0.607
GLYMA07G39350 Glycine max GLYMA07G39350 I 0.607
GLYMA09G01000 Glycine max GLYMA09G01000 I 0.607
GLYMA15G11850 Glycine max GLYMA15G11850 I 0.607
GLYMA17G01370 Glycine max GLYMA17G01370 I 0.607
GSMUA_Achr5G01960_001 Musa acuminata GSMUA_Achr5G01960_001 I 0.607
MTR_2g024390 Medicago truncatula MTR_2g024390 I 0.607
PGSC0003DMG400016711 Solanum tuberosum PGSC0003DMG400016711 I 0.607
POPTR_0004s00650 Populus trichocarpa POPTR_0004s00650 I 0.607
POPTR_0011s01590 Populus trichocarpa POPTR_0011s01590 I 0.607
PRUPE_ppa008461mg Prunus persica PRUPE_ppa008461mg I 0.607
Solyc02g081120.2 Solanum lycopersicum Solyc02g081120.2 I 0.607
TCM_030302 Theobroma cacao TCM_030302 I 0.607
Traes_5BL_B2792D532 Triticum aestivum Traes_5BL_B2792D532 I 0.607
Traes_5DL_5FD3B95C7 Triticum aestivum Traes_5DL_5FD3B95C7 I 0.607
TRIUR3_30866 Triticum urartu TRIUR3_30866 I 0.607
STM Vitis vinifera VIT_10s0116g00190 I 0.607
Ca_00668 Cicer arietinum Ca_00668 I 0.607
Cla014651 Citrullus lanatus Cla014651 I 0.607
Pm009705 Prunus mume Pm009705 I 0.607
29842.m003531 Ricinus communis 29842.m003531 I 0.607
cassava27839.m1 Manihot esculenta cassava27839.m1 I 0.607
cassava7893.valid.m1 Manihot esculenta cassava7893.valid.m1 I 0.607
Cucsa.044950 Cucumis sativus Cucsa.044950 I 0.607
mgf016504m Mimulus guttatus mgf016504m I 0.607
mgf017032m Mimulus guttatus mgf017032m I 0.607
Aquca_012_00046 Aquilegia coerulea Aquca_012_00046 I 0.607
Bostr.22157s0102 Boechera stricta Bostr.22157s0102 I 0.607
Cagra.0077s0011 Capsella grandiflora Cagra.0077s0011 I 0.607
Carubv10022235m.g Capsella rubella Carubv10022235m.g I 0.607
Ciclev10015581m.g Citrus clementina Ciclev10015581m.g I 0.607
Eucgr.D01364 Eucalyptus grandis Eucgr.D01364 I 0.607
evm.TU.supercontig_152.56 Carica papaya evm.TU.supercontig_152.56 I 0.607
gene19507-v1.0-hybrid Fragaria vesca gene19507-v1.0-hybrid I 0.607
Gorai.009G181500 Gossypium raimondii Gorai.009G181500 I 0.607
Gorai.010G183800 Gossypium raimondii Gorai.010G183800 I 0.607
Gorai.011G011700 Gossypium raimondii Gorai.011G011700 I 0.607
MDP0000136226 Malus domestica MDP0000136226 I 0.607
MDP0000231216 Malus domestica MDP0000231216 I 0.607
SapurV1A.0067s0070 Salix purpurea SapurV1A.0067s0070 I 0.607
SapurV1A.0449s0300 Salix purpurea SapurV1A.0449s0300 I 0.607
SapurV1A.4388s0020 Salix purpurea SapurV1A.4388s0020 I 0.607
Thhalv10023520m.g Eutrema salsugineum Thhalv10023520m.g I 0.607
PK16587.1 Cannabis sativa PK16587.1 I 0.607
chr4.CM0288.890.nd Lotus japonicus chr4.CM0288.890.nd I 0.607
LjT03D14.220.nd Lotus japonicus LjT03D14.220.nd I 0.607
PDK_20s1308201g001 Phoenix dactylifera PDK_20s1308201g001 I 0.607
KNAT1 Arabidopsis thaliana AT4G08150 I 0.606
Bo3g043050 Brassica oleracea Bo3g043050 I 0.606
Bra000638 Brassica rapa Bra000638 I 0.606
KNAT1 Arabidopsis lyrata fgenesh2_kg.6__2861__AT4G08150.1 I 0.606
GLYMA0041S00360 Glycine max GLYMA0041S00360 I 0.606
GLYMA14G10430 Glycine max GLYMA14G10430 I 0.606
GSMUA_Achr3G26230_001 Musa acuminata GSMUA_Achr3G26230_001 I 0.606
VIT_17s0000g08710 Vitis vinifera VIT_17s0000g08710 I 0.606
KNAT1 Vitis vinifera VIT_18s0001g08380 I 0.606
Cla021211 Citrullus lanatus Cla021211 I 0.606
Cucsa.395320 Cucumis sativus Cucsa.395320 I 0.606
Bostr.3877s0047 Boechera stricta Bostr.3877s0047 I 0.606
Cagra.7524s0001 Capsella grandiflora Cagra.7524s0001 I 0.606
Carubv10002748m.g Capsella rubella Carubv10002748m.g I 0.606
Thhalv10028724m.g Eutrema salsugineum Thhalv10028724m.g I 0.606
PK25034.1 Cannabis sativa PK25034.1 D 0.606
BGIOSGA003338 Oryza indica BGIOSGA003338 I 0.604
OSH71 Oryza indica BGIOSGA018883 I 0.604
GRMZM2G094241 Zea mays GRMZM2G094241 I 0.604
GRMZM5G832409 Zea mays GRMZM5G832409 I 0.604
LPERR01G11670 Leersia perrieri LPERR01G11670 I 0.604
LPERR05G01890 Leersia perrieri LPERR05G01890 I 0.604
OB01G22470 Oryza brachyantha OB01G22470 I 0.604
OBART01G11630 Oryza barthii OBART01G11630 I 0.604
OBART05G02090 Oryza barthii OBART05G02090 I 0.604
OGLUM01G14210 Oryza glumaepatula OGLUM01G14210 I 0.604
OGLUM05G02160 Oryza glumaepatula OGLUM05G02160 I 0.604
OMERI05G02200 Oryza meridionalis OMERI05G02200 I 0.604
ONIVA05G02030 Oryza nivara ONIVA05G02030 I 0.604
OPUNC01G12460 Oryza punctata OPUNC01G12460 I 0.604
OPUNC05G01700 Oryza punctata OPUNC05G01700 I 0.604
ORGLA01G0097800 Oryza glaberrima ORGLA01G0097800 I 0.604
ORGLA05G0020500 Oryza glaberrima ORGLA05G0020500 I 0.604
ORUFI01G13730 Oryza rufipogon ORUFI01G13730 I 0.604
ORUFI05G02190 Oryza rufipogon ORUFI05G02190 I 0.604
OSH6 Oryza sativa OS01G0302500 I 0.604
OSH71 Oryza sativa OS05G0129700 I 0.604
Sb09g002520 Sorghum bicolor Sb09g002520 I 0.604
Si023561m.g Setaria italica Si023561m.g I 0.604
Pavir.Ca00748 Panicum virgatum Pavir.Ca00748 I 0.604
Pavir.J06042 Panicum virgatum Pavir.J06042 I 0.604
BGIOSGA009878 Oryza indica BGIOSGA009878 I 0.603
BRADI2G11540 Brachypodium distachyon BRADI2G11540 I 0.603
BRADI2G38390 Brachypodium distachyon BRADI2G38390 I 0.603
F775_31450 Aegilops tauschii F775_31450 I 0.603
GLYMA01G42410 Glycine max GLYMA01G42410 I 0.603
GLYMA10G28820 Glycine max GLYMA10G28820 I 0.603
GLYMA11G02960 Glycine max GLYMA11G02960 I 0.603
GLYMA19G41610 Glycine max GLYMA19G41610 I 0.603
GLYMA20G22986 Glycine max GLYMA20G22986 I 0.603
MLOC_57232 Hordeum vulgare MLOC_57232 I 0.603
MTR_1g084060 Medicago truncatula MTR_1g084060 I 0.603
MTR_5g011070 Medicago truncatula MTR_5g011070 I 0.603
OBART03G32710 Oryza barthii OBART03G32710 I 0.603
OGLUM03G32350 Oryza glumaepatula OGLUM03G32350 I 0.603
OLONG_001153 Oryza longistaminata OLONG_001153 I 0.603
OMERI03G29440 Oryza meridionalis OMERI03G29440 I 0.603
ONIVA03G34220 Oryza nivara ONIVA03G34220 I 0.603
OPUNC03G29870 Oryza punctata OPUNC03G29870 I 0.603
ORGLA03G0270100 Oryza glaberrima ORGLA03G0270100 I 0.603
ORGLA03G0296300 Oryza glaberrima ORGLA03G0296300 I 0.603
ORUFI03G34080 Oryza rufipogon ORUFI03G34080 I 0.603
POPTR_0006s27560 Populus trichocarpa POPTR_0006s27560 I 0.603
Sb03g012480 Sorghum bicolor Sb03g012480 I 0.603
Si003268m.g Setaria italica Si003268m.g I 0.603
TCM_026767 Theobroma cacao TCM_026767 I 0.603
Traes_1AS_1B1587F7D Triticum aestivum Traes_1AS_1B1587F7D I 0.603
Traes_1BS_2156D66E1 Triticum aestivum Traes_1BS_2156D66E1 I 0.603
Traes_1DS_543CC7DC9 Triticum aestivum Traes_1DS_543CC7DC9 I 0.603
Traes_4AL_2334B226E Triticum aestivum Traes_4AL_2334B226E I 0.603
TRIUR3_34593 Triticum urartu TRIUR3_34593 I 0.603
VIT_14s0060g01180 Vitis vinifera VIT_14s0060g01180 I 0.603
Ca_03625 Cicer arietinum Ca_03625 I 0.603
30128.m008910 Ricinus communis 30128.m008910 I 0.603
cassava19841.m1 Manihot esculenta cassava19841.m1 I 0.603
mgf000149m Mimulus guttatus mgf000149m I 0.603
Cagra.0628s0006 Capsella grandiflora Cagra.0628s0006 I 0.603
Ciclev10021319m.g Citrus clementina Ciclev10021319m.g I 0.603
Eucgr.D01935 Eucalyptus grandis Eucgr.D01935 I 0.603
evm.TU.supercontig_48.162 Carica papaya evm.TU.supercontig_48.162 I 0.603
Gorai.008G242800 Gossypium raimondii Gorai.008G242800 I 0.603
orange1.1g022056m.g Citrus sinensis orange1.1g022056m.g I 0.603
Pavir.Ea00998 Panicum virgatum Pavir.Ea00998 I 0.603
Pavir.Eb01302 Panicum virgatum Pavir.Eb01302 I 0.603
Pavir.Ia00731 Panicum virgatum Pavir.Ia00731 I 0.603
Pavir.J02025 Panicum virgatum Pavir.J02025 I 0.603
SapurV1A.0282s0220 Salix purpurea SapurV1A.0282s0220 I 0.603
LjSGA_022785.1 Lotus japonicus LjSGA_022785.1 I 0.603
GRMZM2G087741 Zea mays GRMZM2G087741 D 0.602
cassava23924.valid.m1 Manihot esculenta cassava23924.valid.m1 I 0.602