OESDEN_18004 (Oesophagostomum dentatum)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 OESDEN_18004 T315105_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00 		Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OESDEN_18004 Pipsqueak 11 55

Links

Other Pipsqueak family TFs
Other Oesophagostomum dentatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_142040 Schistosoma mansoni Smp_142040 N
Sjc_0023420 Schistosoma japonicum Sjc_0023420 N
SCUD_0000868701 Schistosoma curassoni SCUD_0000868701 N
SMRZ_0001637001 Schistosoma margrebowiei SMRZ_0001637001 N
SMTD_0001990701 Schistosoma mattheei SMTD_0001990701 N
SROB_0001336201 Schistosoma rodhaini SROB_0001336201 N