OESDEN_18004 (Oesophagostomum dentatum)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 OESDEN_18004 T315105_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00 		Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OESDEN_18004 Pipsqueak 11 55

Links

Other Pipsqueak family TFs
Other Oesophagostomum dentatum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_12248 Ancylostoma duodenale ANCDUO_12248 I 1.000
DICVIV_12442 Dictyocaulus viviparus DICVIV_12442 I 1.000
OESDEN_18130 Oesophagostomum dentatum OESDEN_18130 I 1.000
ACAC_0000538501 Angiostrongylus cantonensis ACAC_0000538501 I 0.966
HPBE_0000827001 Heligmosomoides bakeri HPBE_0000827001 I 0.966
NBR_0000704901 Nippostrongylus brasiliensis NBR_0000704901 I 0.966
nRc.2.0.1.g42873 Romanomermis culicivorax nRc.2.0.1.g42873 I 0.941
BTMF_0000266401 Brugia timori BTMF_0000266401 I 0.886
nAv.1.0.1.g08771 Acanthocheilonema viteae nAv.1.0.1.g08771 I 0.886
ASIM_0001367501 Anisakis simplex ASIM_0001367501 I 0.862
nasonia_NCBI_hmm1312624 Nasonia vitripennis nasonia_NCBI_hmm1312624 D 0.795
Hsal_07289--NP_001011629.1_APIME Harpegnathos saltator Hsal_07289--NP_001011629.1_APIME I 0.795
Minc10479 Meloidogyne incognita Minc10479 D 0.791