CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10021750m.g
(
Citrus clementina
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Ciclev10021750m.g
T316005_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10021750m
PLATZ
92
163
RRYVYHDVLRLGDAQKLMNCSFVQPYTTNRAKVIFLHKRPMTRPLKSNGNFCMKCDRSLQDSFLFCSISCKI
Links
Other
PLATZ
family TFs
Other
Citrus clementina
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_005554
Theobroma cacao
TCM_005554
N
0.708
TCM_016018
Theobroma cacao
TCM_016018
N
0.736
cassava17724.valid.m1
Manihot esculenta
cassava17724.valid.m1
N
0.708
Eucgr.E00457
Eucalyptus grandis
Eucgr.E00457
N
0.736
evm.TU.supercontig_29.132
Carica papaya
evm.TU.supercontig_29.132
N
0.736
Gorai.003G169800
Gossypium raimondii
Gorai.003G169800
N
0.750
Gorai.008G237000
Gossypium raimondii
Gorai.008G237000
N
0.750
orange1.1g035685m.g
Citrus sinensis
orange1.1g035685m.g
N
0.972