gene19989-v1.0-hybrid (Fragaria vesca)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 gene19989-v1.0-hybrid T316044_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna19989.1-v1.0-hybrid PLATZ 86 164

Links

Other PLATZ family TFs
Other Fragaria vesca TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla010042 Citrullus lanatus Cla010042 N 0.782
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.756
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.756
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.756
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.744
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.782
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.782
29417.m000034 Ricinus communis 29417.m000034 N 0.875
Pm010795 Prunus mume Pm010795 N 0.808
Cla019628 Citrullus lanatus Cla019628 N 0.744
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.833
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.795
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.718
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.750
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.705
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.718
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.718
TCM_006017 Theobroma cacao TCM_006017 N 0.821
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.705
Si018139m.g Setaria italica Si018139m.g N 0.744
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.744
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.718
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.731
PK04104.1 Cannabis sativa PK04104.1 N 0.808
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.769
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.708
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.795
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.769
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.764
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.744
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.744
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.833
orange1.1g026591m.g Citrus sinensis orange1.1g026591m.g N 0.704
MDP0000891068 Malus domestica MDP0000891068 N 0.756
MDP0000197021 Malus domestica MDP0000197021 N 0.787
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.730
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.782
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.756
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.806
Ciclev10021990m.g Citrus clementina Ciclev10021990m.g N 0.704
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.782
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.705
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.718
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.792
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.792
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.722
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.744
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.769
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.756
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.769
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.718
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.756
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.731
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.718
Bra038403 Brassica rapa Bra038403 N 0.769
Bra014899 Brassica rapa Bra014899 N 0.756
Bo7g041160 Brassica oleracea Bo7g041160 N 0.756
Bo2g121040 Brassica oleracea Bo2g121040 N 0.769
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.705
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.731
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.705
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.808
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.847
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.795
OS06G0666100 Oryza sativa OS06G0666100 N 0.705
OS02G0172800 Oryza sativa OS02G0172800 N 0.731
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.731
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.705
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.705
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.731
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.756
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.731
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.705
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.705
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.731
OBART06G24000 Oryza barthii OBART06G24000 N 0.705
OBART02G05520 Oryza barthii OBART02G05520 N 0.731
OB02G14750 Oryza brachyantha OB02G14750 N 0.731
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.718
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.712