Gorai.005G152700 (Gossypium raimondii)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Gorai.005G152700 T316058_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G01818
M07247_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT2G01818_col_a 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G152700.1 PLATZ 65 142

Links

Other PLATZ family TFs
Other Gossypium raimondii TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDOA004973 Musca domestica MDOA004973 I
PTSG_01032 Salpingoeca rosetta PTSG_01032 I
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N
ARID2 Vicugna pacos ENSVPAG00000004779 N
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N
HelroG195033 Helobdella robusta HelroG195033 N
ISCW014107 Ixodes scapularis ISCW014107 N
PHUM060660 Pediculus humanus PHUM060660 N
SINV17530 Solenopsis invicta SINV17530 N
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N
Tal_R007164 Tyto alba Tal_R007164 N
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N
CLEC001081 Cimex lectularius CLEC001081 N
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N
ARID2 Felis catus ENSFCAG00000012831 N
ARID2 Homo sapiens ENSG00000189079 N
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N
ARID2 Otolemur garnettii ENSOGAG00000024418 N
ACEP25962 Atta cephalotes ACEP25962 N
ARID2 Bos taurus ENSBTAG00000011087 N
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N
ARID2 Equus caballus ENSECAG00000019032 N
ARID2 Canis familiaris ENSCAFG00000009335 N
ARID2 Loxodonta africana ENSLAFG00000004415 N
ARID2 Microcebus murinus ENSMICG00000001487 N
ARID2 Macaca mulatta ENSMMUG00000015962 N
ARID2 Monodelphis domestica ENSMODG00000018527 N
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N
ARID2 Pteropus vampyrus ENSPVAG00000009834 N
ARID2 Sorex araneus ENSSARG00000007415 N