CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_Prox1_10018243
(
Myotis brandtii
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
Myotis_brandtii_Prox1_10018243
T316640_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
1.000
1.000
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
1.000
1.000
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_Prox1_10018243
Prospero
1
132
MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEQVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQ
Links
Other
Prospero
family TFs
Other
Myotis brandtii
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene17117-v1.0-hybrid
Fragaria vesca
gene17117-v1.0-hybrid
N
0.000
mgf025666m
Mimulus guttatus
mgf025666m
N
0.000
Aquca_007_00960
Aquilegia coerulea
Aquca_007_00960
N
0.000
Bostr.25542s0007
Boechera stricta
Bostr.25542s0007
N
0.000
Cagra.1383s0007
Capsella grandiflora
Cagra.1383s0007
N
0.000
Carubv10007256m.g
Capsella rubella
Carubv10007256m.g
N
0.000
Ciclev10027888m.g
Citrus clementina
Ciclev10027888m.g
N
0.000
Eucgr.I01547
Eucalyptus grandis
Eucgr.I01547
N
0.000
evm.TU.supercontig_60.4
Carica papaya
evm.TU.supercontig_60.4
N
0.000
gene12983-v1.0-hybrid
Fragaria vesca
gene12983-v1.0-hybrid
N
0.000
mgf015959m
Mimulus guttatus
mgf015959m
N
0.000
Gorai.013G065300
Gossypium raimondii
Gorai.013G065300
N
0.000
MDP0000200105
Malus domestica
MDP0000200105
N
0.000
MDP0000261311
Malus domestica
MDP0000261311
N
0.000
MDP0000308670
Malus domestica
MDP0000308670
N
0.000
SapurV1A.0047s0510
Salix purpurea
SapurV1A.0047s0510
N
0.000
SapurV1A.0216s0420
Salix purpurea
SapurV1A.0216s0420
N
0.000
SapurV1A.2929s0020
Salix purpurea
SapurV1A.2929s0020
N
0.000
Thhalv10024456m.g
Eutrema salsugineum
Thhalv10024456m.g
N
0.000
PK08522.1
Cannabis sativa
PK08522.1
N
0.000
TCM_007609
Theobroma cacao
TCM_007609
N
0.000
Bo3g034290
Brassica oleracea
Bo3g034290
N
0.000
GLYMA01G00321
Glycine max
GLYMA01G00321
N
0.000
GLYMA11G09400
Glycine max
GLYMA11G09400
N
0.000
GLYMA14G00240
Glycine max
GLYMA14G00240
N
0.000
POPTR_0004s21880
Populus trichocarpa
POPTR_0004s21880
N
0.000
POPTR_0009s17110
Populus trichocarpa
POPTR_0009s17110
N
0.000
PRUPE_ppa001597mg
Prunus persica
PRUPE_ppa001597mg
N
0.000
PRUPE_ppa001606mg
Prunus persica
PRUPE_ppa001606mg
N
0.000
Solyc01g112320.2
Solanum lycopersicum
Solyc01g112320.2
N
0.000
FRS5
Arabidopsis thaliana
AT4G38180
N
0.000
FRS5
Vitis vinifera
VIT_03s0038g04140
N
0.000
VIT_04s0044g01920
Vitis vinifera
VIT_04s0044g01920
N
0.000
Cla015971
Citrullus lanatus
Cla015971
N
0.000
Pm020704
Prunus mume
Pm020704
N
0.000
Pm026968
Prunus mume
Pm026968
N
0.000
cassava23399.valid.m1
Manihot esculenta
cassava23399.valid.m1
N
0.000
cassava9536.m1
Manihot esculenta
cassava9536.m1
N
0.000
Cucsa.099970
Cucumis sativus
Cucsa.099970
N
0.000