CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000017107
(
Tetraodon nigroviridis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSTNIG00000017107
T317548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000020242
Rel
3
183
IQIFEQPKQRRMRFRYKCEGRSAGSIPGENSSDNNRTYPSLQILNYCGKGKVRVYLVTKNEPYRPHPHDLVGKDCKDGFYEAEFGPDRRVIAFQNLGIQCVRRREVKDAILQRINRGINPFSVPAFLDDNYYNTLMVGAAEITEEYDLNVVRLCIQVFLQDETGQYTRPLRPIVTNPIYDN
Links
Other
Rel
family TFs
Other
Tetraodon nigroviridis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RELA
Homo sapiens
ENSG00000173039
D
0.759
ENSAMXG00000004647
Astyanax mexicanus
ENSAMXG00000004647
I
0.805
rel
Danio rerio
ENSDARG00000055276
I
0.775
ENSGMOG00000018800
Gadus morhua
ENSGMOG00000018800
I
0.754
ENSLOCG00000016127
Lepisosteus oculatus
ENSLOCG00000016127
I
0.793
REL
Microcebus murinus
ENSMICG00000010062
I
0.713
ENSONIG00000002983
Oreochromis niloticus
ENSONIG00000002983
I
0.870
rel
Oryzias latipes
ENSORLG00000001586
I
0.822
ENSPFOG00000013038
Poecilia formosa
ENSPFOG00000013038
I
0.882
ENSTRUG00000006394
Takifugu rubripes
ENSTRUG00000006394
I
0.876
ENSXMAG00000007379
Xiphophorus maculatus
ENSXMAG00000007379
I
0.882