CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g6335
(
Steinernema carpocapsae
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
L596_g6335
T317947_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g6335.t1
Rel
129
289
LTVLRQPEQHHRARYLSEGSRGAIKDRTGSSHCTIQLSGYYRPTKIEMFAGTGTDPVSSHPLYKLIPVSGKAANTTPCENVVSSDGIECLQIVLRPESSMTAVLDCVGILKICSYEARSRKVNKNASNCSVRLVFRAYIPSSTPGGPDTIVQSQSEPIKCV
L596_g6335.t2
Rel
129
289
LTVLRQPEQHHRARYLSEGSRGAIKDRTGSSHCTIQLSGYYRPTKIEMFAGTGTDPVSSHPLYKLIPVSGKAANTTPCENVVSSDGIECLQIVLRPESSMTAVLDCVGILKICSYEARSRKVNKNASNCSVRLVFRAYIPSSTPGGPDTIVQSQSEPIKCV
Links
Other
Rel
family TFs
Other
Steinernema carpocapsae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAX2
Loxodonta africana
ENSLAFG00000002388
I
ENSACAG00000014063
Anolis carolinensis
ENSACAG00000014063
N
ENSMGAG00000007277
Meleagris gallopavo
ENSMGAG00000007277
N
ENSNLEG00000014786
Nomascus leucogenys
ENSNLEG00000014786
N
ENSPSIG00000008530
Pelodiscus sinensis
ENSPSIG00000008530
N
ENSPTRG00000039348
Pan troglodytes
ENSPTRG00000039348
N
Alligator_sinensis_CCG009266.1
Alligator sinensis
Alligator_sinensis_CCG009266.1
N
Brh_R000230
Buceros rhinoceros
Brh_R000230
N
Cmyd_10006539
Chelonia mydas
Cmyd_10006539
N
Ogr18044
Ophisaurus gracilis
Ogr18044
N
Tal_R004981
Tyto alba
Tal_R004981
N