CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG009266.1
(
Alligator sinensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Alligator_sinensis_CCG009266.1
T225204_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG009266.1
Homeodomain
130
160
RADTFTQQQLEALDRVFERPSYPDVFQTSEH
Links
Other
Homeodomain
family TFs
Other
Alligator sinensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000008530
Pelodiscus sinensis
ENSPSIG00000008530
N
0.867
Cmyd_10006539
Chelonia mydas
Cmyd_10006539
N
0.867
ENSACAG00000014063
Anolis carolinensis
ENSACAG00000014063
N
0.859
ENSNLEG00000014786
Nomascus leucogenys
ENSNLEG00000014786
N
0.859
PAX2
Loxodonta africana
ENSLAFG00000002388
I
0.859
Ogr18044
Ophisaurus gracilis
Ogr18044
N
0.854
ENSMGAG00000007277
Meleagris gallopavo
ENSMGAG00000007277
N
0.782
Aan_R011820
Calypte anna
Aan_R011820
N
0.782
Brh_R000230
Buceros rhinoceros
Brh_R000230
N
0.782
Tal_R004981
Tyto alba
Tal_R004981
N
0.782