CCM_03895 (Cordyceps militaris)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CCM_03895 T318059_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.672 0.500
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.672 0.500
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.672 0.500
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.672 0.500
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.672 0.500
daf-19
M00709_2.00 		Caenorhabditis elegans
SGTTRCTADG
CHTAGYAACS		 PBM
Narasimhan et al.(2015)
pTH10021 		0.657 0.449
RFX2
M02449_2.00 		Homo sapiens
BGTHRYYADG
CHTRRYDACV		 PBM
Weirauch et al.(2014)
pTH9194 		0.652 0.397
RFX2
M02450_2.00 		Ornithorhynchus anatinus
NGTHRYYANV
BNTRRYDACN		 PBM
Weirauch et al.(2014)
pTH9269 		0.652 0.397
G4VLF2_SCHMA
M02452_2.00 		Schistosoma mansoni
GTTGCTAD
HTAGCAAC		 PBM
Weirauch et al.(2014)
pTH8587 		0.650 0.397
Sjc_0102030
M02455_2.00 		Schistosoma japonicum
GTTRCYANG
CNTRGYAAC		 PBM
Weirauch et al.(2014)
pTH9285 		0.650 0.397
Rfx3
M00188_2.00 		Mus musculus
SNTRRHDACN
NGTHDYYANS		 PBM
Badis et al.(2009)
Rfx3_3961 		0.650 0.385
Rfx3
M03463_2.00 		Mus musculus
SGTTRCCATGGYAACS
SGTTRCCATGGYAACS		 SELEX
Jolma et al.(2013)
Rfx3_1 		0.650 0.385
Rfx3
M09368_2.00 		Mus musculus
BBGTTGCCATGGNRAC
GTYNCCATGGCAACVV		 Misc
Kulakovskiy et al.(2013)
RFX3_MOUSE.H11MO.0.C 		0.650 0.385
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGX92522 RFX 198 275

Links

Other RFX family TFs
Other Cordyceps militaris TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I
Bm2389 Brugia malayi Bm2389 I
HCOI01716000 Haemonchus contortus HCOI01716000 I
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I
L596_g3809 Steinernema carpocapsae L596_g3809 I
L889_g8621 Steinernema feltiae L889_g8621 I
L893_g27201 Steinernema glaseri L893_g27201 I
L898_g2799 Steinernema monticolum L898_g2799 I
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I
SMUV_0000212501 Syphacia muris SMUV_0000212501 I
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I
WBGene00241236 Onchocerca volvulus WBGene00241236 I
CBG17744 Caenorhabditis briggsae CBG17744 I
CBN13729 Caenorhabditis brenneri CBN13729 I
CJA08328 Caenorhabditis japonica CJA08328 I
CRE02711 Caenorhabditis remanei CRE02711 I
CRE10161 Caenorhabditis remanei CRE10161 I
LOAG_01074 Loa loa LOAG_01074 I
Ppa-nhr-31 Pristionchus pacificus PPA24219 I
nhr-31 Caenorhabditis elegans WBGene00003625 I
GPLIN_001106000 Globodera pallida GPLIN_001106000 I
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I
ASU_04305 Ascaris suum ASU_04305 I
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I
DME_0000188101 Dracunculus medinensis DME_0000188101 I
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I
nAv.1.0.1.g09235 Acanthocheilonema viteae nAv.1.0.1.g09235 N
ANCDUO_09404 Ancylostoma duodenale ANCDUO_09404 N