RUNX3 (Bos taurus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSBTAG00000019800 T319341_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.989 0.989
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.989 0.989
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.989 0.989
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.989 0.989
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.989 0.989
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.989 0.989
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.989 0.989
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.989 0.989
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.989 0.989
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.989 0.989
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.989 0.989
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.989 0.989
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.967 0.967
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.967 0.967
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.967 0.967
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.967 0.967
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.967 0.967
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.967 0.967
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.967 0.967
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.967 0.967
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.967 0.967
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.967 0.967
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.967 0.967
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.967 0.967
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.934 0.934
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.934 0.934
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.934 0.934
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.934 0.934
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.934 0.934
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.934 0.934
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.934 0.934
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.934 0.934
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.934 0.934
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.934 0.934
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.934 0.934
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.934 0.934
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.747 0.747
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.747 0.747
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.747 0.747
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.747 0.747
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000026378 Runt 1 91

Links

Other Runt family TFs
Other Bos taurus TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D
TFCP2 Homo sapiens ENSG00000135457 D
TFCP2L1 Homo sapiens ENSG00000115112 D
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I
TFCP2L1 Sus scrofa ENSSSCG00000015732 I
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I
TFCP2 Vicugna pacos ENSVPAG00000007617 I
TFCP2 Pan troglodytes ENSPTRG00000004949 I
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I
tfcp2 Oryzias latipes ENSORLG00000015644 I
TFCP2 Ochotona princeps ENSOPRG00000005747 I
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I
pou6f1 Takifugu rubripes ENSTRUG00000014900 I
tfcp2l1.L Xenopus laevis XB-GENE-997202 I
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I
Tal_R011103 Tyto alba Tal_R011103 I
Tal_R010177 Tyto alba Tal_R010177 I
Pvit_07455 Pogona vitticeps Pvit_07455 I
Pvit_06471 Pogona vitticeps Pvit_06471 I
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I
Gfo_R015659 Geospiza fortis Gfo_R015659 I
Gfo_R001211 Geospiza fortis Gfo_R001211 I
TFCP2 Tursiops truncatus ENSTTRG00000013836 I
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I
Brh_R004848 Buceros rhinoceros Brh_R004848 I
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I
Afo_R006827 Aptenodytes forsteri Afo_R006827 I
Aan_R009566 Calypte anna Aan_R009566 I
Aan_R003641 Calypte anna Aan_R003641 I
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I
TFCP2 Callithrix jacchus ENSCJAG00000017599 I
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I
TFCP2 Felis catus ENSFCAG00000030292 I
TFCP2L1 Felis catus ENSFCAG00000012143 I
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I
TFCP2L1 Equus caballus ENSECAG00000024837 I
TFCP2 Equus caballus ENSECAG00000020650 I
tfcp2 Danio rerio ENSDARG00000060306 I
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I
TFCP2L1 Gallus gallus ENSGALG00000011635 I
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I
TFCP2 Canis familiaris ENSCAFG00000007831 I
TFCP2L1 Canis familiaris ENSCAFG00000004788 I
TFCP2 Bos taurus ENSBTAG00000019312 I
TFCP2L1 Bos taurus ENSBTAG00000007765 I
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I
TFCP2 Anolis carolinensis ENSACAG00000012289 I
TFCP2 Macaca mulatta ENSMMUG00000000152 I
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I
TFCP2 Otolemur garnettii ENSOGAG00000007969 I
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I
Tfcp2 Mus musculus ENSMUSG00000009733 I
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I
TFCP2 Myotis lucifugus ENSMLUG00000013918 I
TFCP2L1 Microcebus murinus ENSMICG00000007161 I
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I
TFCP2 Loxodonta africana ENSLAFG00000009123 I
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I
tfcp2l1 Takifugu rubripes ENSTRUG00000002438 N
tfcp2l1 Danio rerio ENSDARG00000029497 N
ENSPFOG00000014602 Poecilia formosa ENSPFOG00000014602 N
ENSPFOG00000001485 Poecilia formosa ENSPFOG00000001485 N
tfcp2l1 Gasterosteus aculeatus ENSGACG00000001549 N
tfcp2l1 Tetraodon nigroviridis ENSTNIG00000017829 N