HMEL014739 (Heliconius melpomene)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 HMEL014739 T319581_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.900 0.900
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.900 0.900
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.900 0.900
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.900 0.900
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.733 0.733
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.700 0.700
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.700 0.700
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.700 0.700
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.700 0.700
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.700 0.700
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.700 0.700
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.700 0.700
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.700 0.700
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.700 0.700
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.700 0.700
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.700 0.700
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HMEL014739-PA Runt 1 30

Links

Other Runt family TFs
Other Heliconius melpomene TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Runx1 Mus musculus ENSMUSG00000022952 D 0.000
lz Drosophila melanogaster FBgn0002576 D 0.900
run Drosophila melanogaster FBgn0003300 D 0.733
CpipJ_CPIJ001309 Culex pipiens CpipJ_CPIJ001309 I 0.000
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.000
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.000
AAEL006160 Aedes aegypti AAEL006160 I 0.867
AAEL006167 Aedes aegypti AAEL006167 I 0.000
AAEL007040 Aedes aegypti AAEL007040 I 0.000
ACEP16400 Atta cephalotes ACEP16400 I 0.000
ACEP16410 Atta cephalotes ACEP16410 I 0.767
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.867
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I 0.000
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.800
AGAP001094 Anopheles gambiae AGAP001094 I 0.700
AGAP002506 Anopheles gambiae AGAP002506 I 0.000
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.700
CGI_10005366 Crassostrea gigas CGI_10005366 I 0.000
CPIJ001309 Culex quinquefasciatus CPIJ001309 I 0.000
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.000
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.000
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.000
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I 0.700
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.000
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.700
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.000
RUNX2 Felis catus ENSFCAG00000022480 I 0.700
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.000
RUNX2 Loxodonta africana ENSLAFG00000005054 I 0.700
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I 0.000
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.000
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I 0.000
RUNX2 Myotis lucifugus ENSMLUG00000000514 I 0.700
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.000
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I 0.000
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I 0.700
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.000
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I 0.700
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I 0.000
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.000
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I 0.000
RUNX2 Tupaia belangeri ENSTBEG00000000948 I 0.700
run Drosophila pseudoobscura FBgn0013862 I 0.733
run Drosophila virilis FBgn0013920 I 0.733
run Drosophila simulans FBgn0016352 I 0.733
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.733
RunxA Drosophila melanogaster FBgn0083981 I 0.000
run Drosophila yakuba FBgn0084618 I 0.733
run Drosophila erecta FBgn0085118 I 0.733
GF15967 Drosophila ananassae FBgn0092990 I 0.733
GF15970 Drosophila ananassae FBgn0092993 I 0.733
GF15983 Drosophila ananassae FBgn0093006 I 0.000
GG17578 Drosophila erecta FBgn0109803 I 0.000
GG18309 Drosophila erecta FBgn0110525 I 0.900
GG19691 Drosophila erecta FBgn0111893 I 0.733
GH17737 Drosophila grimshawi FBgn0125207 I 0.733
GH17740 Drosophila grimshawi FBgn0125210 I 0.733
GH17774 Drosophila grimshawi FBgn0125244 I 0.000
GI14398 Drosophila mojavensis FBgn0137150 I 0.000
GI15119 Drosophila mojavensis FBgn0137869 I 0.000
GI15491 Drosophila mojavensis FBgn0138240 I 0.733
GL15800 Drosophila persimilis FBgn0153404 I 0.733
GL15806 Drosophila persimilis FBgn0153410 I 0.733
GL15927 Drosophila persimilis FBgn0153531 I 0.000
GL16499 Drosophila persimilis FBgn0154103 I 0.900
GM22478 Drosophila sechellia FBgn0177348 I 0.900
GM22662 Drosophila sechellia FBgn0177532 I 0.000
GM23044 Drosophila sechellia FBgn0177912 I 0.733
GM23050 Drosophila sechellia FBgn0177918 I 0.733
GD16951 Drosophila simulans FBgn0188530 I 0.900
GD17495 Drosophila simulans FBgn0189047 I 0.733
GJ18742 Drosophila virilis FBgn0205894 I 0.000
GJ18917 Drosophila virilis FBgn0206063 I 0.000
GJ19245 Drosophila virilis FBgn0206390 I 0.733
GK19810 Drosophila willistoni FBgn0221808 I 0.733
GK20052 Drosophila willistoni FBgn0222049 I 0.000
GK25373 Drosophila willistoni FBgn0227332 I 0.900
GE15340 Drosophila yakuba FBgn0232921 I 0.000
GE17788 Drosophila yakuba FBgn0235232 I 0.900
GE17890 Drosophila yakuba FBgn0235328 I 0.733
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.900
GA25684 Drosophila pseudoobscura FBgn0247061 I 0.000
RunxB Drosophila melanogaster FBgn0259162 I 0.733
GB52718 Apis mellifera GB52718 I 0.000
GB52719 Apis mellifera GB52719 I 0.000
GB52721 Apis mellifera GB52721 I 0.000
GB52761 Apis mellifera GB52761 I 0.000
HMEL009842 Heliconius melpomene HMEL009842 I 0.800
ISCW004493 Ixodes scapularis ISCW004493 I 0.000
KGM_21065 Danaus plexippus KGM_21065 I 1.000
KGM_21067 Danaus plexippus KGM_21067 I 0.733
KGM_21075 Danaus plexippus KGM_21075 I 0.000
L798_10922 Zootermopsis nevadensis L798_10922 I 0.000
LotgiG96224 Lottia gigantea LotgiG96224 I 0.000
MCINX000302 Melitaea cinxia MCINX000302 I 0.967
MCINX005905 Melitaea cinxia MCINX005905 I 0.000
MESCA003521 Megaselia scalaris MESCA003521 I 0.000
MESCA007078 Megaselia scalaris MESCA007078 I 0.000
MESCA007079 Megaselia scalaris MESCA007079 I 0.000
NV10998 Nasonia vitripennis NV10998 I 0.867
NV11000 Nasonia vitripennis NV11000 I 0.833
NV17759 Nasonia vitripennis NV17759 I 0.000
PHUM333300 Pediculus humanus PHUM333300 I 0.800
PHUM333310 Pediculus humanus PHUM333310 I 0.700
PHUM333320 Pediculus humanus PHUM333320 I 0.000
PHUM333340 Pediculus humanus PHUM333340 I 0.833
RPRC005391 Rhodnius prolixus RPRC005391 I 0.833
SINV13317 Solenopsis invicta SINV13317 I 0.800
SINV13356 Solenopsis invicta SINV13356 I 0.000
SINV13363 Solenopsis invicta SINV13363 I 0.000
TC005566 Tribolium castaneum TC005566 I 0.000
TC005796 Tribolium castaneum TC005796 I 0.000
TC006536 Tribolium castaneum TC006536 I 0.800
TC006542 Tribolium castaneum TC006542 I 0.000
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.867
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.833
Aan_R005895 Calypte anna Aan_R005895 I 0.000
Aan_R007315 Calypte anna Aan_R007315 I 0.000
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.000
Afo_R008955 Aptenodytes forsteri Afo_R008955 I 0.000
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I 0.000
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.000
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.000
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.800
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.000
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.833
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.000
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I 0.700
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.900
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.800
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.000
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.000
Tal_R011874 Tyto alba Tal_R011874 I 0.000
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.000
CLEC011122 Cimex lectularius CLEC011122 I 0.000
LCUP002647 Lucilia cuprina LCUP002647 I 0.800
LCUP002652 Lucilia cuprina LCUP002652 I 0.000
LCUP002656 Lucilia cuprina LCUP002656 I 0.000
LCUP002659 Lucilia cuprina LCUP002659 I 0.000
LDEC006645 Leptinotarsa decemlineata LDEC006645 I 0.000
AALB007752 Anopheles albimanus AALB007752 I 0.000
AALB007753 Anopheles albimanus AALB007753 I 0.000
AALB007754 Anopheles albimanus AALB007754 I 0.000
AALB009220 Anopheles albimanus AALB009220 I 0.733
AARA004356 Anopheles arabiensis AARA004356 I 0.000
AARA011472 Anopheles arabiensis AARA011472 I 0.700
AATE002063 Anopheles atroparvus AATE002063 I 0.867
AATE017340 Anopheles atroparvus AATE017340 I 0.000
ACHR004078 Anopheles christyi ACHR004078 I 0.000
ACHR006341 Anopheles christyi ACHR006341 I 0.000
ACOM031089 Anopheles coluzzii ACOM031089 I 0.700
ACUA016618 Anopheles culicifacies ACUA016618 I 0.000
ADIR005600 Anopheles dirus ADIR005600 I 0.000
AEPI003479 Anopheles epiroticus AEPI003479 I 0.000
AEPI010884 Anopheles epiroticus AEPI010884 I 0.000
AFAF000166 Anopheles farauti AFAF000166 I 0.000
AFUN005474 Anopheles funestus AFUN005474 I 0.000
AFUN010423 Anopheles funestus AFUN010423 I 0.000
AMAM011616 Anopheles maculatus AMAM011616 I 0.880
AMAM016300 Anopheles maculatus AMAM016300 I 0.000
AMEC007551 Anopheles melas AMEC007551 I 0.700
AMEM004753 Anopheles merus AMEM004753 I 0.700
AMEM017856 Anopheles merus AMEM017856 I 0.000
AMIN002518 Anopheles minimus AMIN002518 I 0.000
AMIN005759 Anopheles minimus AMIN005759 I 0.000
AQUA009446 Anopheles quadriannulatus AQUA009446 I 0.733
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.700
ASIS001308 Anopheles sinensis ASIS001308 I 0.000
ASIS002518 Anopheles sinensis ASIS002518 I 0.000
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.000
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.867
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.000
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.800
MDOA009046 Musca domestica MDOA009046 I 0.000
MDOA010744 Musca domestica MDOA010744 I 0.800
MDOA011942 Musca domestica MDOA011942 I 0.000
MDOA013149 Musca domestica MDOA013149 I 0.733
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.833
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.000