CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc03548
(
Meloidogyne incognita
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
Minc03548
T319714_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc03548
Runt
19
128
EEALRRISGQCRLQRTCHSDIFCSRLPAHWRSNKSLPTPFIILALCPVPDGKVYVSAGNDENFCADVKNNTAEFTGQMARFSDLRFVGKSGRGKNFNLSITIFTIPYTQA
Links
Other
Runt
family TFs
Other
Meloidogyne incognita
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc04853
Meloidogyne incognita
Minc04853
N
0.981
Minc18686
Meloidogyne incognita
Minc18686
N
0.776
maker-nMf.1.1.scaf09276-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf09276-snap-gene-0.5
N
0.833
MhA1_Contig405.frz3.gene22
Meloidogyne hapla
MhA1_Contig405.frz3.gene22
N
0.917