ACHR006341 (Anopheles christyi)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 ACHR006341 T319729_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.831 0.831
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.715 0.715
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.715 0.715
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.715 0.715
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.715 0.715
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.715 0.715
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.715 0.715
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.715 0.715
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.715 0.715
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.715 0.715
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.715 0.715
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.715 0.715
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.715 0.715
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.700 0.700
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.700 0.700
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.700 0.700
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACHR006341-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles christyi TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.B01932 Eucalyptus grandis Eucgr.B01932 N
Traes_4DL_E88B8B0F6 Triticum aestivum Traes_4DL_E88B8B0F6 N
TRIUR3_21153 Triticum urartu TRIUR3_21153 N
VIT_14s0060g02420 Vitis vinifera VIT_14s0060g02420 N
Ca_03676 Cicer arietinum Ca_03676 N
Pm003293 Prunus mume Pm003293 N
30128.m008807 Ricinus communis 30128.m008807 N
cassava22130.valid.m1 Manihot esculenta cassava22130.valid.m1 N
Cucsa.091190 Cucumis sativus Cucsa.091190 N
mgf016253m Mimulus guttatus mgf016253m N
Aquca_016_00289 Aquilegia coerulea Aquca_016_00289 N
Bostr.25219s0040 Boechera stricta Bostr.25219s0040 N
Cagra.4395s0091 Capsella grandiflora Cagra.4395s0091 N
Carubv10011895m.g Capsella rubella Carubv10011895m.g N
Ciclev10000178m.g Citrus clementina Ciclev10000178m.g N
Traes_4BS_BDBC1B1FA Triticum aestivum Traes_4BS_BDBC1B1FA N
evm.TU.supercontig_48.77 Carica papaya evm.TU.supercontig_48.77 N
gene22503-v1.0-hybrid Fragaria vesca gene22503-v1.0-hybrid N
Gorai.004G240400 Gossypium raimondii Gorai.004G240400 N
Lus10017092.g Linum usitatissimum Lus10017092.g N
Lus10037812.g Linum usitatissimum Lus10037812.g N
orange1.1g002177m.g Citrus sinensis orange1.1g002177m.g N
Pavir.J33002 Panicum virgatum Pavir.J33002 N
SapurV1A.0066s0380 Salix purpurea SapurV1A.0066s0380 N
SapurV1A.0424s0260 Salix purpurea SapurV1A.0424s0260 N
Thhalv10006723m.g Eutrema salsugineum Thhalv10006723m.g N
PK22697.1 Cannabis sativa PK22697.1 N
chr5.CM0299.460.nd Lotus japonicus chr5.CM0299.460.nd N
PDK_20s1361681g001 Phoenix dactylifera PDK_20s1361681g001 N
OMERI03G15300 Oryza meridionalis OMERI03G15300 N
AT1G09060 Arabidopsis thaliana AT1G09060 N
Bo8g058150 Brassica oleracea Bo8g058150 N
Bra030754 Brassica rapa Bra030754 N
BRADI1G62640 Brachypodium distachyon BRADI1G62640 N
F775_27911 Aegilops tauschii F775_27911 N
fgenesh2_kg.1__941__AT1G09060.2 Arabidopsis lyrata fgenesh2_kg.1__941__AT1G09060.2 N
GLYMA10G29371 Glycine max GLYMA10G29371 N
GLYMA20G37910 Glycine max GLYMA20G37910 N
GRMZM2G428933 Zea mays GRMZM2G428933 N
LPERR03G14970 Leersia perrieri LPERR03G14970 N
MLOC_15207 Hordeum vulgare MLOC_15207 N
MTR_1g083120 Medicago truncatula MTR_1g083120 N
OGLUM03G17600 Oryza glumaepatula OGLUM03G17600 N
AMTR_s00057p00206860 Amborella trichopoda AMTR_s00057p00206860 N
ONIVA03G18210 Oryza nivara ONIVA03G18210 N
ORGLA03G0163900 Oryza glaberrima ORGLA03G0163900 N
ORUFI03G17780 Oryza rufipogon ORUFI03G17780 N
OS03G0346700 Oryza sativa OS03G0346700 N
PGSC0003DMG400022424 Solanum tuberosum PGSC0003DMG400022424 N
POPTR_0005s02710 Populus trichocarpa POPTR_0005s02710 N
POPTR_0013s01970 Populus trichocarpa POPTR_0013s01970 N
PRUPE_ppa020523mg Prunus persica PRUPE_ppa020523mg N
Sb01g035540 Sorghum bicolor Sb01g035540 N
Si034162m.g Setaria italica Si034162m.g N
Solyc02g078790.2 Solanum lycopersicum Solyc02g078790.2 N
TCM_026634 Theobroma cacao TCM_026634 N
Traes_4AS_93108583B Triticum aestivum Traes_4AS_93108583B N