OBART01G08660 (Oryza barthii)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OBART01G08660 T320562_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.939 0.939
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G08660.1 RWP-RK 523 571

Links

Other RWP-RK family TFs
Other Oryza barthii TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_00492 Wuchereria bancrofti WUBG_00492 N 0.000
Bm3899 Brugia malayi Bm3899 N 0.000
LOAG_18157 Loa loa LOAG_18157 N 0.000
Minc00757 Meloidogyne incognita Minc00757 N 0.000
ASIM_0001677501 Anisakis simplex ASIM_0001677501 N 0.000
ASU_12719 Ascaris suum ASU_12719 N 0.000
BTMF_0001429501 Brugia timori BTMF_0001429501 N 0.000
DME_0000214701 Dracunculus medinensis DME_0000214701 N 0.000
EVEC_0000982901 Enterobius vermicularis EVEC_0000982901 N 0.000
nAv.1.0.1.g02876 Acanthocheilonema viteae nAv.1.0.1.g02876 N 0.000
nDi.2.2.2.g08539 Dirofilaria immitis nDi.2.2.2.g08539 N 0.000
nLs.2.1.2.g02844 Litomosoides sigmodontis nLs.2.1.2.g02844 N 0.000
PEQ_0000361701 Parascaris equorum PEQ_0000361701 N 0.000
TCLT_0000822701 Thelazia callipaeda TCLT_0000822701 N 0.000
TCNE_0001786701 Toxocara canis TCNE_0001786701 N 0.000