OPUNC03G02270 (Oryza punctata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OPUNC03G02270 T320625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN

NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.816 0.816
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD

HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC03G02270.1 RWP-RK 627 675

Links

Other RWP-RK family TFs
Other Oryza punctata TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.000
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.000
LjSGA_024860.1 Lotus japonicus LjSGA_024860.1 I 0.000
LjSGA_102554.1 Lotus japonicus LjSGA_102554.1 I 0.000
GLYMA10G28320 Glycine max GLYMA10G28320 N 0.000
MTR_1g084950 Medicago truncatula MTR_1g084950 N 0.000
MTR_5g047580 Medicago truncatula MTR_5g047580 N 0.000