mg020279m (Mimulus guttatus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 mg020279m T321041_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.878 0.878
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mg020279m RWP-RK 194 242

Links

Other RWP-RK family TFs
Other Mimulus guttatus TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CCA1 Arabidopsis thaliana AT2G46830 D 0.000
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.000
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I 0.000
OS05G0162800 Oryza sativa OS05G0162800 I 0.000
Sb01g012460 Sorghum bicolor Sb01g012460 I 0.000
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.000
Si038786m.g Setaria italica Si038786m.g I 0.000
Traes_1BS_24DBD38A8 Triticum aestivum Traes_1BS_24DBD38A8 I 0.000
TRIUR3_24634 Triticum urartu TRIUR3_24634 I 0.000
ONIVA05G04710 Oryza nivara ONIVA05G04710 I 0.000
gw1.9.308.1 Chlorella NC64A gw1.9.308.1 I 0.000
Bostr.25993s0083 Boechera stricta Bostr.25993s0083 I 0.000
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.000
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.000
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.000
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.000
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.000
OMERI05G04320 Oryza meridionalis OMERI05G04320 I 0.000
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I 0.000
OBART05G04370 Oryza barthii OBART05G04370 I 0.000
OBART05G04360 Oryza barthii OBART05G04360 I 0.000
OB05G14050 Oryza brachyantha OB05G14050 I 0.000
MLOC_59912 Hordeum vulgare MLOC_59912 I 0.000
MLOC_5590 Hordeum vulgare MLOC_5590 I 0.000
LPERR05G03900 Leersia perrieri LPERR05G03900 I 0.000
GRMZM2G115070 Zea mays GRMZM2G115070 I 0.000
LHY Arabidopsis lyrata fgenesh2_kg.1__131__AT1G01060.3 I 0.000
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I 0.000
BRADI2G34670 Brachypodium distachyon BRADI2G34670 I 0.000
Bra004503 Brassica rapa Bra004503 I 0.000
Bo4g006930 Brassica oleracea Bo4g006930 I 0.000
BGIOSGA018757 Oryza indica BGIOSGA018757 I 0.000