GRMZM2G115070 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G115070 T272034_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.691 0.630
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.691 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G115070_P01 Myb 25 70

Links

Other Myb/SANT family TFs
Other Zea mays TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb01g012460 Sorghum bicolor Sb01g012460 I 0.891
GRMZM2G415077 Zea mays GRMZM2G415077 N 0.878
Si038786m.g Setaria italica Si038786m.g I 0.834
BGIOSGA018757 Oryza indica BGIOSGA018757 I 0.793
ONIVA05G04710 Oryza nivara ONIVA05G04710 I 0.793
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I 0.793
OS05G0162800 Oryza sativa OS05G0162800 I 0.793
OBART05G04370 Oryza barthii OBART05G04370 I 0.785
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I 0.785
OMERI05G04320 Oryza meridionalis OMERI05G04320 I 0.785
BRADI2G34670 Brachypodium distachyon BRADI2G34670 I 0.768
OBART05G04360 Oryza barthii OBART05G04360 I 0.759
OB05G14050 Oryza brachyantha OB05G14050 I 0.751
Pavir.J12412 Panicum virgatum Pavir.J12412 N 0.711
LPERR05G03900 Leersia perrieri LPERR05G03900 I 0.699
Bo4g006930 Brassica oleracea Bo4g006930 I 0.697
Bra004503 Brassica rapa Bra004503 I 0.697
CCA1 Arabidopsis thaliana AT2G46830 D 0.691
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.691
Bostr.25993s0083 Boechera stricta Bostr.25993s0083 I 0.691
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.691
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.691
MLOC_5590 Hordeum vulgare MLOC_5590 I 0.681
Traes_1BS_24DBD38A8 Triticum aestivum Traes_1BS_24DBD38A8 I 0.681
TRIUR3_24634 Triticum urartu TRIUR3_24634 I 0.681
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.676
e_gw1.06.00.251.1 Ostreococcus tauri e_gw1.06.00.251.1 N 0.676
F775_22448 Aegilops tauschii F775_22448 I 0.675
EuGene.0400010070 Ostreococcus RCC809 EuGene.0400010070 I 0.662