ENSAMXG00000001001 (Astyanax mexicanus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSAMXG00000001001 T321613_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.986 0.787
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.986 0.773
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.983 0.840
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.982 0.840
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.982 0.773
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.982 0.773
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.982 0.760
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.982 0.760
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.982 0.760
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.982 0.760
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.982 0.760
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.981 0.813
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.981 0.813
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.981 0.813
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.981 0.813
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.981 0.813
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.981 0.813
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.981 0.813
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.958 0.667
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000001028 SAND 80 155

Links

Other SAND family TFs
Other Astyanax mexicanus TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AFUN010327 Anopheles funestus AFUN010327 N
ACHR000531 Anopheles christyi ACHR000531 N
ACHR003205 Anopheles christyi ACHR003205 N
ACOM030952 Anopheles coluzzii ACOM030952 N
ACOM030968 Anopheles coluzzii ACOM030968 N
ACUA001624 Anopheles culicifacies ACUA001624 N
ADIR000747 Anopheles dirus ADIR000747 N
ADIR000749 Anopheles dirus ADIR000749 N
AEPI000388 Anopheles epiroticus AEPI000388 N
AEPI000391 Anopheles epiroticus AEPI000391 N
AFAF015377 Anopheles farauti AFAF015377 N
AFAF016537 Anopheles farauti AFAF016537 N
AFUN010324 Anopheles funestus AFUN010324 N
AATE020717 Anopheles atroparvus AATE020717 N
AMAM001181 Anopheles maculatus AMAM001181 N
AMAM021192 Anopheles maculatus AMAM021192 N
AMEC002017 Anopheles melas AMEC002017 N
AMEC011119 Anopheles melas AMEC011119 N
AMEM007634 Anopheles merus AMEM007634 N
AMEM014363 Anopheles merus AMEM014363 N
AMIN006409 Anopheles minimus AMIN006409 N
AMIN006412 Anopheles minimus AMIN006412 N
AQUA003680 Anopheles quadriannulatus AQUA003680 N
AQUA014420 Anopheles quadriannulatus AQUA014420 N
ASIS001250 Anopheles sinensis ASIS001250 N
ASTEI01637 Anopheles stephensi ASTEI01637 N
L798_14385 Zootermopsis nevadensis L798_14385 N
CpipJ_CPIJ000955 Culex pipiens CpipJ_CPIJ000955 N
AAEL001637 Aedes aegypti AAEL001637 N
AAEL001652 Aedes aegypti AAEL001652 N
ACEP11448 Atta cephalotes ACEP11448 N
ADAC000872 Anopheles darlingi ADAC000872 N
AGAP007822 Anopheles gambiae AGAP007822 N
AGAP007824 Anopheles gambiae AGAP007824 N
CPIJ000953 Culex quinquefasciatus CPIJ000953 N
CPIJ000955 Culex quinquefasciatus CPIJ000955 N
DAPPUDRAFT_45040 Daphnia pulex DAPPUDRAFT_45040 N
GB41320 Apis mellifera GB41320 N
ISCW003677 Ixodes scapularis ISCW003677 N
CpipJ_CPIJ000953 Culex pipiens CpipJ_CPIJ000953 N
SINV12291 Solenopsis invicta SINV12291 N
TC003170 Tribolium castaneum TC003170 N
YQE_07457 Dendroctonus ponderosae YQE_07457 N
Cflo_10835--XP_001121050.1_APIME Camponotus floridanus Cflo_10835--XP_001121050.1_APIME N
Hsal_11851--XP_001121050.1_APIME Harpegnathos saltator Hsal_11851--XP_001121050.1_APIME N
LDEC024027 Leptinotarsa decemlineata LDEC024027 N
AALB001157 Anopheles albimanus AALB001157 N
AALB001160 Anopheles albimanus AALB001160 N
AARA012018 Anopheles arabiensis AARA012018 N
AARA012021 Anopheles arabiensis AARA012021 N
AATE014155 Anopheles atroparvus AATE014155 N
AATE016471 Anopheles atroparvus AATE016471 N