CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GMEB1
(
Homo sapiens
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSG00000162419
T321714_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene encodes a member of KDWK gene family which associates with GMEB2 protein. The GMEB1-GMEB2 complex is essential for parvovirus DNA replication. Studies in rat for a similar gene suggest that this gene's role is to modulate the transactivation of the glucocorticoid receptor when it is bound to glucocorticoid response elements. Three alternative spliced transcript variants encoding different isoforms exist. [provided by RefSeq, Feb 2016]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN
NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
(Direct)
(Direct)
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
(Direct)
(Direct)
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN
NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.994
1.000
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN
NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.994
0.987
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN
NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.994
0.987
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN
NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.994
0.974
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.991
0.921
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY
RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.991
0.908
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH
DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.988
0.750
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN
NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.987
0.750
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN
NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.986
0.724
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM
KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.986
0.724
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.986
0.724
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.986
0.724
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM
KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.986
0.724
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.986
0.724
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.986
0.724
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN
NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.962
0.632
For this family, TFs with SR scores >
0.843
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02460_2.00
SAND
45
121
EDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQI
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000294409
SAND
89
165
EDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQI
ENSP00000355186
SAND
79
155
EDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQI
ENSP00000362922
SAND
79
155
EDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKSTLKDWKRAIRLGGIMLRKMMDSGQI
Links
Other
SAND
family TFs
Other
Homo sapiens
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R008896
Aptenodytes forsteri
Afo_R008896
I
0.994
ENSPANG00000018743
Papio anubis
ENSPANG00000018743
I
0.994
GMEB1
Gorilla gorilla
ENSGGOG00000009221
I
0.994
Aan_R005833
Calypte anna
Aan_R005833
I
0.994
GMEB1
Vicugna pacos
ENSVPAG00000006781
I
0.994
ENSGALG00000000981
Gallus gallus
ENSGALG00000000981
I
0.994
ENSOARG00000002809
Ovis aries
ENSOARG00000002809
I
0.994
GMEB1
Felis catus
ENSFCAG00000018209
I
0.994
Gmeb1
Rattus norvegicus
ENSRNOG00000010910
I
0.994
Brh_R012802
Buceros rhinoceros
Brh_R012802
I
0.994
Alligator_sinensis_CCG020726.1
Alligator sinensis
Alligator_sinensis_CCG020726.1
I
0.994
GMEB1
Tursiops truncatus
ENSTTRG00000013602
I
0.994
GMEB1
Loxodonta africana
ENSLAFG00000011849
I
0.994
ENSSHAG00000009099
Sarcophilus harrisii
ENSSHAG00000009099
I
0.994
GMEB1
Myotis lucifugus
ENSMLUG00000012602
I
0.994
GMEB1
Sorex araneus
ENSSARG00000001145
I
0.994
ENSMPUG00000015503
Mustela putorius furo
ENSMPUG00000015503
I
0.994
ENSMODG00000010947
Monodelphis domestica
ENSMODG00000010947
D
0.994
Gmeb1
Mus musculus
ENSMUSG00000028901
D
0.994
GMEB1
Pteropus vampyrus
ENSPVAG00000017223
D
0.994
GMEB1
Taeniopygia guttata
ENSTGUG00000000731
I
0.994
GMEB1
Ornithorhynchus anatinus
ENSOANG00000006127
I
0.994
ENSMEUG00000004906
Macropus eugenii
ENSMEUG00000004906
I
0.994
ENSNLEG00000009837
Nomascus leucogenys
ENSNLEG00000009837
I
0.994
GMEB1
Meleagris gallopavo
ENSMGAG00000001716
D
0.994
Cmyd_10009780
Chelonia mydas
Cmyd_10009780
I
0.994
ENSFALG00000001378
Ficedula albicollis
ENSFALG00000001378
I
0.994
Pvit_15570
Pogona vitticeps
Pvit_15570
I
0.994
GMEB1
Pan troglodytes
ENSPTRG00000000438
I
0.994
GMEB1
Callithrix jacchus
ENSCJAG00000009754
I
0.994
ENSCPOG00000013402
Cavia porcellus
ENSCPOG00000013402
I
0.994
GMEB1
Canis familiaris
ENSCAFG00000011711
I
0.994
GMEB1
Bos taurus
ENSBTAG00000001160
I
0.994
ENSPPYG00000001635
Pongo abelii
ENSPPYG00000001635
I
0.994
ENSAMEG00000011405
Ailuropoda melanoleuca
ENSAMEG00000011405
I
0.994
ENSPSIG00000016715
Pelodiscus sinensis
ENSPSIG00000016715
I
0.994
ENSAPLG00000002955
Anas platyrhynchos
ENSAPLG00000002955
I
0.994
GMEB1
Oryctolagus cuniculus
ENSOCUG00000010893
I
0.994
Ogr01986
Ophisaurus gracilis
Ogr01986
I
0.994
ENSCSAG00000001017
Chlorocebus sabaeus
ENSCSAG00000001017
I
0.994
ENSP00000294409-D1
Bos grunniens
ENSP00000294409-D1
I
0.994
GMEB1
Equus caballus
ENSECAG00000009764
I
0.994
ENSP00000381890
Macaca fascicularis
ENSP00000381890
I
0.994
GMEB1
Dasypus novemcinctus
ENSDNOG00000025258
I
0.994
Myotis_brandtii_GMEB1_10029602
Myotis brandtii
Myotis_brandtii_GMEB1_10029602
I
0.994
Gfo_R008934
Geospiza fortis
Gfo_R008934
I
0.994
ENSACAG00000010878
Anolis carolinensis
ENSACAG00000010878
I
0.993
ENSLACG00000011757
Latimeria chalumnae
ENSLACG00000011757
I
0.993
gmeb1.S
Xenopus laevis
XB-GENE-1002174
D
0.991
gmeb1
Xenopus tropicalis
XB-GENE-1002169
D
0.991
ENSAPLG00000010816
Anas platyrhynchos
ENSAPLG00000010816
I
0.990
ENSFALG00000005856
Ficedula albicollis
ENSFALG00000005856
I
0.989
ENSPSIG00000013495
Pelodiscus sinensis
ENSPSIG00000013495
I
0.989
Gfo_R005287
Geospiza fortis
Gfo_R005287
I
0.989
GMEB2
Taeniopygia guttata
ENSTGUG00000006996
I
0.989
Cmyd_10009585
Chelonia mydas
Cmyd_10009585
I
0.989
Tal_R007596
Tyto alba
Tal_R007596
I
0.989
Aan_R015716
Calypte anna
Aan_R015716
I
0.989
Brh_R002176
Buceros rhinoceros
Brh_R002176
I
0.989
ENSGALG00000027470
Gallus gallus
ENSGALG00000027470
I
0.988
ENSLOCG00000001741
Lepisosteus oculatus
ENSLOCG00000001741
I
0.988
GMEB2
Meleagris gallopavo
ENSMGAG00000006922
D
0.988
Afo_R010444
Aptenodytes forsteri
Afo_R010444
I
0.988
ENSSHAG00000018066
Sarcophilus harrisii
ENSSHAG00000018066
I
0.987
Pvit_01323
Pogona vitticeps
Pvit_01323
I
0.987
GMEB2
Anolis carolinensis
ENSACAG00000011613
D
0.987
AAH84751
Xenopus laevis
AAH84751
I
0.987
GMEB2
Monodelphis domestica
ENSMODG00000016974
I
0.987
ENSPPYG00000011242
Pongo abelii
ENSPPYG00000011242
I
0.986
ENSPANG00000024129
Papio anubis
ENSPANG00000024129
I
0.986
gmeb2.S
Xenopus laevis
XB-GENE-5755500
I
0.986
ENSP00000266068-D1
Bos grunniens
ENSP00000266068-D1
I
0.986
ENSSTOG00000023031
Ictidomys tridecemlineatus
ENSSTOG00000023031
I
0.986
GMEB2
Pteropus vampyrus
ENSPVAG00000013473
I
0.986
GMEB2
Pan troglodytes
ENSPTRG00000013744
I
0.986
Gmeb2
Rattus norvegicus
ENSRNOG00000013339
I
0.986
Myotis_brandtii_GMEB2_10023457
Myotis brandtii
Myotis_brandtii_GMEB2_10023457
I
0.986
ENSOARG00000010596
Ovis aries
ENSOARG00000010596
I
0.986
GMEB2
Callithrix jacchus
ENSCJAG00000010283
I
0.986
GMEB2
Cavia porcellus
ENSCPOG00000025567
I
0.986
GMEB2
Gorilla gorilla
ENSGGOG00000008653
I
0.986
ENSMMUG00000006168
Macaca mulatta
ENSMMUG00000006168
I
0.986
ENSMPUG00000008374
Mustela putorius furo
ENSMPUG00000008374
I
0.986
ENSLOCG00000003512
Lepisosteus oculatus
ENSLOCG00000003512
I
0.986
ENSCSAG00000016428
Chlorocebus sabaeus
ENSCSAG00000016428
I
0.986
GMEB2
Homo sapiens
ENSG00000101216
D
0.986
GMEB2
Felis catus
ENSFCAG00000031273
I
0.986
GMEB2
Equus caballus
ENSECAG00000019377
I
0.986
GMEB2
Dasypus novemcinctus
ENSDNOG00000041843
I
0.986
Gmeb2
Mus musculus
ENSMUSG00000038705
D
0.986
GMEB2
Myotis lucifugus
ENSMLUG00000014606
I
0.986
GMEB2
Canis familiaris
ENSCAFG00000013008
I
0.986
GMEB2
Bos taurus
ENSBTAG00000014769
I
0.986
ENSNLEG00000010094
Nomascus leucogenys
ENSNLEG00000010094
I
0.986
GMEB2
Otolemur garnettii
ENSOGAG00000008826
I
0.986
ENSAMEG00000001647
Ailuropoda melanoleuca
ENSAMEG00000001647
I
0.986
GMEB2
Oryctolagus cuniculus
ENSOCUG00000025815
I
0.986
GMEB2
Ornithorhynchus anatinus
ENSOANG00000004939
I
0.985
Alligator_sinensis_CCG018614.2
Alligator sinensis
Alligator_sinensis_CCG018614.2
I
0.984
GMEB2
Loxodonta africana
ENSLAFG00000012335
I
0.983
ENSAMXG00000001001
Astyanax mexicanus
ENSAMXG00000001001
I
0.982
ENSTSYG00000002782
Tarsius syrichta
ENSTSYG00000002782
I
0.982
GMEB1
Echinops telfairi
ENSETEG00000000775
I
0.981
ENSAMXG00000001956
Astyanax mexicanus
ENSAMXG00000001956
I
0.980
ENSXMAG00000012852
Xiphophorus maculatus
ENSXMAG00000012852
I
0.979
ENSPFOG00000017553
Poecilia formosa
ENSPFOG00000017553
I
0.979
ENSTNIG00000009672
Tetraodon nigroviridis
ENSTNIG00000009672
I
0.979
ENSONIG00000017972
Oreochromis niloticus
ENSONIG00000017972
I
0.978
ENSTRUG00000014439
Takifugu rubripes
ENSTRUG00000014439
I
0.978
GMEB2
Danio rerio
ENSDARG00000093240
I
0.978
ENSPFOG00000002327
Poecilia formosa
ENSPFOG00000002327
I
0.978
si:ch73-302a13.2
Tetraodon nigroviridis
ENSTNIG00000002528
I
0.976
Ogr06841
Ophisaurus gracilis
Ogr06841
I
0.975
ENSLACG00000007355
Latimeria chalumnae
ENSLACG00000007355
I
0.975
ENSGMOG00000014002
Gadus morhua
ENSGMOG00000014002
I
0.972
ENSAMXG00000015681
Astyanax mexicanus
ENSAMXG00000015681
I
0.971
ENSGMOG00000000899
Gadus morhua
ENSGMOG00000000899
I
0.970
ENSXMAG00000012875
Xiphophorus maculatus
ENSXMAG00000012875
I
0.970
si:ch73-302a13.2
Gasterosteus aculeatus
ENSGACG00000003620
I
0.970
ENSPFOG00000004759
Poecilia formosa
ENSPFOG00000004759
I
0.970
gmeb1
Oryzias latipes
ENSORLG00000008294
I
0.969
ENSMEUG00000008516
Macropus eugenii
ENSMEUG00000008516
I
0.968
GMEB2
Procavia capensis
ENSPCAG00000000522
I
0.966
GMEB2
Microcebus murinus
ENSMICG00000010614
I
0.965
gmeb1
Danio rerio
ENSDARG00000062060
I
0.965
ENSMMUP00000008108
Macaca fascicularis
ENSMMUP00000008108
I
0.965
GMEB2
Erinaceus europaeus
ENSEEUG00000001478
I
0.965
si:ch73-302a13.2
Takifugu rubripes
ENSTRUG00000012194
I
0.964
gmeb1
Tetraodon nigroviridis
ENSTNIG00000003832
I
0.963
GMEB1
Takifugu rubripes
ENSTRUG00000011964
I
0.963
gmeb2
Xenopus tropicalis
XB-GENE-5755487
I
0.963
ENSONIG00000007575
Oreochromis niloticus
ENSONIG00000007575
I
0.963
ENSCING00000003435
Ciona intestinalis
ENSCING00000003435
D
0.962
ENSCSAVG00000000320
Ciona savignyi
ENSCSAVG00000000320
I
0.962
ENSORLG00000020761
Oryzias latipes
ENSORLG00000020761
I
0.959
gmeb1
Gasterosteus aculeatus
ENSGACG00000007791
I
0.954
ENSGMOG00000013494
Gadus morhua
ENSGMOG00000013494
I
0.952
ENSTNIG00000008152
Tetraodon nigroviridis
ENSTNIG00000008152
I
0.950
GMEB1
Macaca mulatta
ENSMMUG00000011390
I
0.931
GMEB1
Procavia capensis
ENSPCAG00000005575
I
0.306