CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Q4RVQ8_TETNG
(
Tetraodon nigroviridis
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
Q4RVQ8_TETNG
T322072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q4RVQ8_TETNG
M02466_2.00
Tetraodon nigroviridis
NNNNDCGRNN
NNYCGHNNNN
PBM
Weirauch et al.(2014)
pTH6271
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.843
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02466_2.00
SAND
1
75
NGEPCIEVECGENKALLYINKLCQGSKGPSIKYRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGIL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q4RVQ8_TETNG
SAND
365
439
NGEPCIEVECGENKALLYINKLCQGSKGPSIKYRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGIL
Links
Other
SAND
family TFs
Other
Tetraodon nigroviridis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANHX
Homo sapiens
ENSG00000227059
D
ANHX
Oryctolagus cuniculus
ENSOCUG00000024082
I
Tal_R010403
Tyto alba
Tal_R010403
I
Ogr14831
Ophisaurus gracilis
Ogr14831
I
Myotis_brandtii_ceh_10005230
Myotis brandtii
Myotis_brandtii_ceh_10005230
I
Gfo_R010890
Geospiza fortis
Gfo_R010890
I
ENSP00000409950
Macaca fascicularis
ENSP00000409950
I
ENSBTAP00000037738-D1
Bos grunniens
ENSBTAP00000037738-D1
I
Afo_R009036
Aptenodytes forsteri
Afo_R009036
I
Aan_R008279
Calypte anna
Aan_R008279
I
ENSTGUG00000009899
Taeniopygia guttata
ENSTGUG00000009899
I
ENSPSIG00000013281
Pelodiscus sinensis
ENSPSIG00000013281
I
ENSPANG00000016069
Papio anubis
ENSPANG00000016069
I
ANHX
Otolemur garnettii
ENSOGAG00000026442
I
ANHX
Bos taurus
ENSBTAG00000026626
I
ENSOARG00000008922
Ovis aries
ENSOARG00000008922
I
ANHX
Macaca mulatta
ENSMMUG00000001259
I
ANHX
Myotis lucifugus
ENSMLUG00000022300
I
ANHX
Gorilla gorilla
ENSGGOG00000024900
I
ANHX
Felis catus
ENSFCAG00000030622
I
ENSFALG00000007397
Ficedula albicollis
ENSFALG00000007397
I
ANHX
Equus caballus
ENSECAG00000013669
I
ENSCSAG00000001805
Chlorocebus sabaeus
ENSCSAG00000001805
I
ENSCJAG00000002388
Callithrix jacchus
ENSCJAG00000002388
I
ANHX
Canis familiaris
ENSCAFG00000005892
I