Cagra.1225s0078 (Capsella grandiflora)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Cagra.1225s0078 T322237_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1225s0078.1.p SAND 30 115

Links

Other SAND family TFs
Other Capsella grandiflora TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hmg20b Mus musculus ENSMUSG00000020232 D
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I
BGIBMGA005325 Bombyx mori BGIBMGA005325 I
CapteG155070 Capitella teleta CapteG155070 I
CapteG191691 Capitella teleta CapteG191691 I
CGI_10028818 Crassostrea gigas CGI_10028818 I
HMG20A Anolis carolinensis ENSACAG00000011520 I
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I
HMG20A Bos taurus ENSBTAG00000020441 I
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I
HMG20A Canis familiaris ENSCAFG00000018061 I
HMG20B Canis familiaris ENSCAFG00000019215 I
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I
HMG20B Callithrix jacchus ENSCJAG00000003488 I
HMG20A Callithrix jacchus ENSCJAG00000011131 I
HMG20B Cavia porcellus ENSCPOG00000010777 I
HMG20A Cavia porcellus ENSCPOG00000011704 I
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I
hmg20a Danio rerio ENSDARG00000031198 I
hmg20b Danio rerio ENSDARG00000042045 I
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I
Hmg20a Dipodomys ordii ENSDORG00000000623 I
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I
HMG20A Erinaceus europaeus ENSEEUG00000004472 I
HMG20A Echinops telfairi ENSETEG00000015812 I
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I
HMG20A Felis catus ENSFCAG00000022539 I
HMG20B Felis catus ENSFCAG00000026167 I
HMG20B Homo sapiens ENSG00000064961 I
HMG20A Homo sapiens ENSG00000140382 I
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I
HMG20B Gallus gallus ENSGALG00000027838 I
HMG20A Gorilla gorilla ENSGGOG00000008439 I
HMG20B Gorilla gorilla ENSGGOG00000014805 I
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I
HMG20B Loxodonta africana ENSLAFG00000007845 I
HMG20A Loxodonta africana ENSLAFG00000018273 I
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I
HMG20B Meleagris gallopavo ENSMGAG00000001362 I
HMG20A Meleagris gallopavo ENSMGAG00000003179 I
HMG20A Microcebus murinus ENSMICG00000011025 I
HMG20A Myotis lucifugus ENSMLUG00000011648 I
HMG20B Myotis lucifugus ENSMLUG00000022392 I
HMG20A Macaca mulatta ENSMMUG00000007430 I
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I
HMG20B Monodelphis domestica ENSMODG00000006884 I
HMG20A Monodelphis domestica ENSMODG00000012113 I
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I
Hmg20a Mus musculus ENSMUSG00000032329 I
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I
HMG20A Otolemur garnettii ENSOGAG00000006630 I
HMG20B Otolemur garnettii ENSOGAG00000014171 I
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I
HMG20A Ochotona princeps ENSOPRG00000011000 I
hmg20a Oryzias latipes ENSORLG00000001794 I
hmg20b Oryzias latipes ENSORLG00000004640 I
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I
HMG20B Procavia capensis ENSPCAG00000010772 I
HMG20A Procavia capensis ENSPCAG00000013879 I
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I
HMG20A Pan troglodytes ENSPTRG00000007326 I
HMG20B Pan troglodytes ENSPTRG00000010268 I
HMG20B Pteropus vampyrus ENSPVAG00000004300 I
Hmg20a Rattus norvegicus ENSRNOG00000016905 I
Hmg20b Rattus norvegicus ENSRNOG00000020601 I
HMG20A Sorex araneus ENSSARG00000012609 I
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I
HMG20A Sus scrofa ENSSSCG00000001871 I
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I
HMG20A Tupaia belangeri ENSTBEG00000015283 I
HMG20B Taeniopygia guttata ENSTGUG00000000169 I
HMG20A Taeniopygia guttata ENSTGUG00000003690 I
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I
hmg20a Takifugu rubripes ENSTRUG00000016127 I
eef2l2 Takifugu rubripes ENSTRUG00000017921 I
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I
HMG20A Tursiops truncatus ENSTTRG00000006500 I
HMG20B Tursiops truncatus ENSTTRG00000008832 I
HMG20A Vicugna pacos ENSVPAG00000010013 I
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I
GB41600 Apis mellifera GB41600 I
HMEL017569 Heliconius melpomene HMEL017569 I
L798_15457 Zootermopsis nevadensis L798_15457 I
LotgiG196090 Lottia gigantea LotgiG196090 I
LotgiG231408 Lottia gigantea LotgiG231408 I
MCINX003064 Melitaea cinxia MCINX003064 I
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I
NV11068 Nasonia vitripennis NV11068 I
RPRC008043 Rhodnius prolixus RPRC008043 I
SMAR000790 Strigamia maritima SMAR000790 I
SMAR002604 Strigamia maritima SMAR002604 I
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I
TriadG23407 Trichoplax adhaerens TriadG23407 I
YQE_10385 Dendroctonus ponderosae YQE_10385 I
Aan_R011684 Calypte anna Aan_R011684 I
Aan_R011791 Calypte anna Aan_R011791 I
Afo_R007008 Aptenodytes forsteri Afo_R007008 I
Afo_R007636 Aptenodytes forsteri Afo_R007636 I
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I
Brh_R011859 Buceros rhinoceros Brh_R011859 I
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I
ENSP00000371133 Macaca fascicularis ENSP00000371133 I
Gfo_R004366 Geospiza fortis Gfo_R004366 I
Gfo_R007604 Geospiza fortis Gfo_R007604 I
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I
Pvit_01997 Pogona vitticeps Pvit_01997 I
Pvit_08123 Pogona vitticeps Pvit_08123 I
Tal_R006697 Tyto alba Tal_R006697 I
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I
CLEC002862 Cimex lectularius CLEC002862 I
HHAL010521-PA Halyomorpha halys HHAL010521-PA I
LDEC010438 Leptinotarsa decemlineata LDEC010438 I
hmg20b.S Xenopus laevis XB-GENE-17338323 I
hmg20b Xenopus tropicalis XB-GENE-5809048 I
hmg20b.L Xenopus laevis XB-GENE-5809135 I
hmg20a Xenopus tropicalis XB-GENE-955353 I
hmg20a.L Xenopus laevis XB-GENE-955359 I
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I
TC011144 Tribolium castaneum TC011144 N