CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr3.CM0468.20.nd
(
Lotus japonicus
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
chr3.CM0468.20.nd
T322296_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr3.CM0468.20.nd
SAND
1
54
KLTPAAFEKHSGRETAKKWKNNIWVIVDGEKVPLYKTVLLKYYNQVSRGANGSN
Links
Other
SAND
family TFs
Other
Lotus japonicus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ULT1
Arabidopsis thaliana
AT4G28190
N
0.913
SapurV1A.0048s0510
Salix purpurea
SapurV1A.0048s0510
N
0.989
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
0.989
SapurV1A.2807s0020
Salix purpurea
SapurV1A.2807s0020
N
0.983
Thhalv10026038m.g
Eutrema salsugineum
Thhalv10026038m.g
N
0.933
LjSGA_080382.1
Lotus japonicus
LjSGA_080382.1
N
0.886