TCM_031595 (Theobroma cacao)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 TCM_031595 T323090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.966 0.747
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.966 0.853
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.960 0.773
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.957 0.733
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.957 0.733
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.957 0.733
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.956 0.733
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.956 0.707
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.956 0.760
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.955 0.760
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.955 0.760
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.955 0.760
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.951 0.720
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.948 0.747
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.945 0.733
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.945 0.733
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.945 0.733
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.940 0.800
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.940 0.800
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.940 0.800
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.914 0.627
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY13068 SBP 68 142
EOY13069 SBP 113 187

Links

Other SBP family TFs
Other Theobroma cacao TFs

562 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TTAC_0000915101 Hydatigera taeniaeformis TTAC_0000915101 I
GL50803_17540 Giardia lamblia GL50803_17540 I
ISCW014189 Ixodes scapularis ISCW014189 I
LotgiG131492 Lottia gigantea LotgiG131492 I
SMAR003184 Strigamia maritima SMAR003184 I
BGLB000541 Biomphalaria glabrata BGLB000541 I
SMAR006121 Strigamia maritima SMAR006121 I
SPU_023530 Strongylocentrotus purpuratus SPU_023530 I
LDEC011073 Leptinotarsa decemlineata LDEC011073 I
ECANG7_06547 Echinococcus canadensis ECANG7_06547 I
EmuJ_001157200 Echinococcus multilocularis EmuJ_001157200 I
HDID_0000342501 Hymenolepis diminuta HDID_0000342501 I
HNAJ_0000082601 Hymenolepis nana HNAJ_0000082601 I
TsM_000529300 Taenia solium TsM_000529300 I
SSLN_0000405401 Schistocephalus solidus SSLN_0000405401 I
Sakowv30017861m.g Saccoglossus kowalevskii Sakowv30017861m.g I
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I
CGI_10006980 Crassostrea gigas CGI_10006980 I
MCOS_0000539101 Mesocestoides corti MCOS_0000539101 I
HmN_000451100 Hymenolepis microstoma HmN_000451100 I
SMU15017366 Schmidtea mediterranea SMU15017366 N
SMU15033702 Schmidtea mediterranea SMU15033702 N
AALB003072 Anopheles albimanus AALB003072 N
Sjc_0060650 Schistosoma japonicum Sjc_0060650 N
AARA000452 Anopheles arabiensis AARA000452 N
HHAL005964-PA Halyomorpha halys HHAL005964-PA N
LCUP015823 Lucilia cuprina LCUP015823 N
AATE006796 Anopheles atroparvus AATE006796 N
ACHR005336 Anopheles christyi ACHR005336 N
ACUA025715 Anopheles culicifacies ACUA025715 N
ADIR002498 Anopheles dirus ADIR002498 N
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N
AEPI003661 Anopheles epiroticus AEPI003661 N
CLEC012210 Cimex lectularius CLEC012210 N
PPAI002183 Phlebotomus papatasi PPAI002183 N
T265_07301 Opisthorchis viverrini T265_07301 N
SMTD_0000055001 Schistosoma mattheei SMTD_0000055001 N
SCUD_0001703701 Schistosoma curassoni SCUD_0001703701 N
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N
PXEA_0000852601 Protopolystoma xenopodis PXEA_0000852601 N
DME_0001005001 Dracunculus medinensis DME_0001005001 N
D915_06741 Fasciola hepatica D915_06741 N
csin104729 Clonorchis sinensis csin104729 N
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N
A_08377 Schistosoma haematobium A_08377 N
AFAF010393 Anopheles farauti AFAF010393 N
MDOA004559 Musca domestica MDOA004559 N
LLOJ000864 Lutzomyia longipalpis LLOJ000864 N
ASTEI11512 Anopheles stephensi ASTEI11512 N
AQUA004105 Anopheles quadriannulatus AQUA004105 N
AMIN000696 Anopheles minimus AMIN000696 N
AMEM013442 Anopheles merus AMEM013442 N
AMEC021754 Anopheles melas AMEC021754 N
AMAM004700 Anopheles maculatus AMAM004700 N
AFUN009891 Anopheles funestus AFUN009891 N
arid1ab Gasterosteus aculeatus ENSGACG00000007627 N
GF23141 Drosophila ananassae FBgn0100135 N
osa Drosophila yakuba FBgn0041640 N
ENSXMAG00000010716 Xiphophorus maculatus ENSXMAG00000010716 N
ENSTSYG00000011521 Tarsius syrichta ENSTSYG00000011521 N
arid1ab Takifugu rubripes ENSTRUG00000012325 N
arid1aa Tetraodon nigroviridis ENSTNIG00000009659 N
ENSPVAG00000010595 Pteropus vampyrus ENSPVAG00000010595 N
ENSPFOG00000002208 Poecilia formosa ENSPFOG00000002208 N
ENSONIG00000007618 Oreochromis niloticus ENSONIG00000007618 N
ENSLOCG00000003798 Lepisosteus oculatus ENSLOCG00000003798 N
ENSGMOG00000001024 Gadus morhua ENSGMOG00000001024 N
GG16758 Drosophila erecta FBgn0108988 N
arid1ab Danio rerio ENSDARG00000101891 N
ENSAMXG00000013606 Astyanax mexicanus ENSAMXG00000013606 N
DAPPUDRAFT_327651 Daphnia pulex DAPPUDRAFT_327651 N
CPIJ010152 Culex quinquefasciatus CPIJ010152 N
BGIBMGA010273 Bombyx mori BGIBMGA010273 N
AGAP001786 Anopheles gambiae AGAP001786 N
ADAC008556 Anopheles darlingi ADAC008556 N
ACYPI006497 Acyrthosiphon pisum ACYPI006497 N
ACEP26642 Atta cephalotes ACEP26642 N
AAEL017280 Aedes aegypti AAEL017280 N
NV21537 Nasonia vitripennis NV21537 N
EuGene.0000090416 Micromonas pusilla EuGene.0000090416 N
CpipJ_CPIJ010152 Culex pipiens CpipJ_CPIJ010152 N
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N
YQE_09239 Dendroctonus ponderosae YQE_09239 N
tetur02g14180 Tetranychus urticae tetur02g14180 N
tetur02g14160 Tetranychus urticae tetur02g14160 N
TC013586 Tribolium castaneum TC013586 N
Smp_156170 Schistosoma mansoni Smp_156170 N
SINV22763 Solenopsis invicta SINV22763 N
PHUM080380 Pediculus humanus PHUM080380 N
estExt_fgenesh2_pg.C_Chr_060255 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_060255 N
ML16136a Mnemiopsis leidyi ML16136a N
KGM_12579 Danaus plexippus KGM_12579 N
GB44899 Apis mellifera GB44899 N
osa Drosophila melanogaster FBgn0261885 N
GA26236 Drosophila pseudoobscura FBgn0247610 N
GK22507 Drosophila willistoni FBgn0224484 N
GJ24712 Drosophila virilis FBgn0211788 N
GM15347 Drosophila sechellia FBgn0170267 N
GI23637 Drosophila mojavensis FBgn0146363 N
GH15872 Drosophila grimshawi FBgn0123343 N