Cla006776 (Citrullus lanatus)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Cla006776 T323186_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.984 0.907
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.938 0.800
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.937 0.813
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla006776 SBP 159 233

Links

Other SBP family TFs
Other Citrullus lanatus TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF641 Homo sapiens ENSG00000167528 D 0.000
Zfp641 Rattus norvegicus ENSRNOG00000032447 I 0.000
ENSNLEG00000017881 Nomascus leucogenys ENSNLEG00000017881 I 0.000
ENSOARG00000019279 Ovis aries ENSOARG00000019279 I 0.000
ZNF641 Oryctolagus cuniculus ENSOCUG00000005451 I 0.000
ZNF641 Otolemur garnettii ENSOGAG00000005519 I 0.000
ENSPANG00000014075 Papio anubis ENSPANG00000014075 I 0.000
ZNF641 Procavia capensis ENSPCAG00000005206 I 0.000
ENSPPYG00000004457 Pongo abelii ENSPPYG00000004457 I 0.000
ZNF641 Pan troglodytes ENSPTRG00000004878 I 0.000
Zfp641 Mus musculus ENSMUSG00000022987 I 0.000
ZNF641 Sorex araneus ENSSARG00000009301 I 0.000
ZNF641 Sus scrofa ENSSSCG00000021654 I 0.000
ENSSTOG00000001970 Ictidomys tridecemlineatus ENSSTOG00000001970 I 0.000
ENSTSYG00000001375 Tarsius syrichta ENSTSYG00000001375 I 0.000
ZNF641 Tursiops truncatus ENSTTRG00000015952 I 0.000
ENSMMUP00000019015 Macaca fascicularis ENSMMUP00000019015 I 0.000
ENSP00000301042-D1 Bos grunniens ENSP00000301042-D1 I 0.000
Myotis_brandtii_ZNF641_10022121 Myotis brandtii Myotis_brandtii_ZNF641_10022121 I 0.000
ZNF641 Echinops telfairi ENSETEG00000017660 I 0.000
ZNF641 Bos taurus ENSBTAG00000016496 I 0.000
ZNF641 Canis familiaris ENSCAFG00000009010 I 0.000
ZNF641 Callithrix jacchus ENSCJAG00000020716 I 0.000
ZNF641 Cavia porcellus ENSCPOG00000002770 I 0.000
ENSCSAG00000006278 Chlorocebus sabaeus ENSCSAG00000006278 I 0.000
ZNF641 Dasypus novemcinctus ENSDNOG00000014189 I 0.000
ZNF641 Equus caballus ENSECAG00000022720 I 0.000
ZNF641 Erinaceus europaeus ENSEEUG00000002648 I 0.000
ENSAMEG00000008139 Ailuropoda melanoleuca ENSAMEG00000008139 I 0.000
ZNF641 Felis catus ENSFCAG00000001972 I 0.000
ZNF641 Gorilla gorilla ENSGGOG00000013643 I 0.000
ZNF641 Loxodonta africana ENSLAFG00000029324 I 0.000
ZNF641 Microcebus murinus ENSMICG00000007360 I 0.000
ZNF641 Myotis lucifugus ENSMLUG00000003695 I 0.000
ZNF641 Macaca mulatta ENSMMUG00000014484 I 0.000
ENSMPUG00000000169 Mustela putorius furo ENSMPUG00000000169 I 0.000