SIGF (Arabidopsis lyrata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 fgenesh2_kg.4__1742__AT2G36990.1 T323828_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__1742__AT2G36990.1 Sigma 70 310 380

Links

Other Sigma 70 family TFs
Other Arabidopsis lyrata TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TIGD1 Homo sapiens ENSG00000221944 D
ENSMICG00000012178 Microcebus murinus ENSMICG00000012178 I
ENSP00000386186-D1 Bos grunniens ENSP00000386186-D1 I
ENSTSYG00000019343 Tarsius syrichta ENSTSYG00000019343 I
TIGD1 Pan troglodytes ENSPTRG00000038833 I
ENSPPYG00000013281 Pongo abelii ENSPPYG00000013281 I
TIGD1 Otolemur garnettii ENSOGAG00000030017 I
ENSNLEG00000018314 Nomascus leucogenys ENSNLEG00000018314 I
ENSMPUG00000018790 Mustela putorius furo ENSMPUG00000018790 I
TIGD1 Macaca mulatta ENSMMUG00000022150 I
TIGD1 Canis familiaris ENSCAFG00000032642 I
TIGD1 Gorilla gorilla ENSGGOG00000016685 I
ENSECAG00000017813 Equus caballus ENSECAG00000017813 I
TIGD1 Equus caballus ENSECAG00000015495 I
ENSCSAG00000017233 Chlorocebus sabaeus ENSCSAG00000017233 I
ENSCSAG00000016482 Chlorocebus sabaeus ENSCSAG00000016482 I
TIGD1 Callithrix jacchus ENSCJAG00000013785 I