OB08G17050 (Oryza brachyantha)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OB08G17050 T323888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB08G17050.1 Sigma 70 342 412

Links

Other Sigma 70 family TFs
Other Oryza brachyantha TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCRM Arabidopsis thaliana AT3G26744 D
cassava7475.valid.m1 Manihot esculenta cassava7475.valid.m1 I
30131.m006993 Ricinus communis 30131.m006993 I
Cucsa.156040 Cucumis sativus Cucsa.156040 I
mgf012194m Mimulus guttatus mgf012194m I
mgf015974m Mimulus guttatus mgf015974m I
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I
Carubv10017099m.g Capsella rubella Carubv10017099m.g I
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I
MDP0000247912 Malus domestica MDP0000247912 I
MDP0000304669 Malus domestica MDP0000304669 I
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I
PK06940.1 Cannabis sativa PK06940.1 I
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I
Pm016093 Prunus mume Pm016093 I
Bo00285s440 Brassica oleracea Bo00285s440 I
Bo5g016510 Brassica oleracea Bo5g016510 I
Bo7g083870 Brassica oleracea Bo7g083870 I
Bo8g065080 Brassica oleracea Bo8g065080 I
Bra016749 Brassica rapa Bra016749 I
Bra019794 Brassica rapa Bra019794 I
Bra025226 Brassica rapa Bra025226 I
Bra032947 Brassica rapa Bra032947 I
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I
GLYMA16G05390 Glycine max GLYMA16G05390 I
GLYMA19G27483 Glycine max GLYMA19G27483 I
MLOC_46407 Hordeum vulgare MLOC_46407 I
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I
TCM_017336 Theobroma cacao TCM_017336 I
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I
Cla003283 Citrullus lanatus Cla003283 I
SCRM2 Arabidopsis thaliana AT1G12860 I
Ca_06997 Cicer arietinum Ca_06997 N
PDK_20s1709441g001 Phoenix dactylifera PDK_20s1709441g001 N