Sb01g000390 (Sorghum bicolor)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Sb01g000390 T323970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g000390.1 Sigma 70 278 348
Sb01g000390.2 Sigma 70 272 342
Sb01g000390.3 Sigma 70 271 341
Sb01g000390.4 Sigma 70 270 340
Sb01g000390.5 Sigma 70 271 341

Links

Other Sigma 70 family TFs
Other Sorghum bicolor TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si031900m.g Setaria italica Si031900m.g I
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I
OS08G0543700 Oryza sativa OS08G0543700 I
OS09G0519100 Oryza sativa OS09G0519100 I
Sb02g030110 Sorghum bicolor Sb02g030110 I
Sb02g030120 Sorghum bicolor Sb02g030120 I
Sb07g025310 Sorghum bicolor Sb07g025310 I
Si015513m.g Setaria italica Si015513m.g I
BGIOSGA029426 Oryza indica BGIOSGA029426 I
Si032741m.g Setaria italica Si032741m.g I
Eucgr.E01042 Eucalyptus grandis Eucgr.E01042 I
Eucgr.E01049 Eucalyptus grandis Eucgr.E01049 I
Gorai.004G129600 Gossypium raimondii Gorai.004G129600 I
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I
Pavir.J01049 Panicum virgatum Pavir.J01049 I
Pavir.J40111 Panicum virgatum Pavir.J40111 I
ONIVA09G17720 Oryza nivara ONIVA09G17720 I
BGIOSGA026551 Oryza indica BGIOSGA026551 I
GRMZM2G013688 Zea mays GRMZM2G013688 I
GRMZM2G038479 Zea mays GRMZM2G038479 I
GRMZM2G107560 Zea mays GRMZM2G107560 I
LPERR03G22350 Leersia perrieri LPERR03G22350 I
LPERR08G19100 Leersia perrieri LPERR08G19100 I
LPERR09G12780 Leersia perrieri LPERR09G12780 I
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I
OMERI08G17270 Oryza meridionalis OMERI08G17270 I
ONIVA08G25370 Oryza nivara ONIVA08G25370 I
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N
TRIUR3_29141 Triticum urartu TRIUR3_29141 N
F775_01879 Aegilops tauschii F775_01879 N
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N
Pavir.Fa00117 Panicum virgatum Pavir.Fa00117 N
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N
Pavir.Fb02348 Panicum virgatum Pavir.Fb02348 N
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N
Pavir.J27331 Panicum virgatum Pavir.J27331 N
Sb03g006510 Sorghum bicolor Sb03g006510 N
Traes_5BL_D45BBFEBC Triticum aestivum Traes_5BL_D45BBFEBC N
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N
Traes_2BL_F38E03233 Triticum aestivum Traes_2BL_F38E03233 N
Traes_2BL_F38E032331 Triticum aestivum Traes_2BL_F38E032331 N
GRMZM2G472671 Zea mays GRMZM2G472671 N
MLOC_40535 Hordeum vulgare MLOC_40535 N
Si015213m.g Setaria italica Si015213m.g N
Si015072m.g Setaria italica Si015072m.g N
Si015026m.g Setaria italica Si015026m.g N
Si015024m.g Setaria italica Si015024m.g N
Si014241m.g Setaria italica Si014241m.g N
Sb2273s002010 Sorghum bicolor Sb2273s002010 N
Sb07g025340 Sorghum bicolor Sb07g025340 N
Sb07g025330 Sorghum bicolor Sb07g025330 N
Sb07g025320 Sorghum bicolor Sb07g025320 N