Sb01g000390 (Sorghum bicolor)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Sb01g000390 T323970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g000390.1 Sigma 70 278 348
Sb01g000390.2 Sigma 70 272 342
Sb01g000390.3 Sigma 70 271 341
Sb01g000390.4 Sigma 70 270 340
Sb01g000390.5 Sigma 70 271 341

Links

Other Sigma 70 family TFs
Other Sorghum bicolor TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G144196 Zea mays GRMZM2G144196 N 0.986
OB08G17050 Oryza brachyantha OB08G17050 N 0.986
OPUNC08G07030 Oryza punctata OPUNC08G07030 N 0.986
Si034994m.g Setaria italica Si034994m.g N 0.986
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N 0.986
BGIOSGA028267 Oryza indica BGIOSGA028267 N 0.972
OBART08G07320 Oryza barthii OBART08G07320 N 0.972
OGLUM08G08160 Oryza glumaepatula OGLUM08G08160 N 0.972
OLONG_007958 Oryza longistaminata OLONG_007958 N 0.972
OMERI03G18460 Oryza meridionalis OMERI03G18460 N 0.972
ONIVA08G08070 Oryza nivara ONIVA08G08070 N 0.972
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N 0.972
ORUFI08G08440 Oryza rufipogon ORUFI08G08440 N 0.972
OS08G0242800 Oryza sativa OS08G0242800 N 0.972
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N 0.972
LPERR08G06520 Leersia perrieri LPERR08G06520 N 0.958
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N 0.958
BRADI1G00750 Brachypodium distachyon BRADI1G00750 N 0.930
F775_07378 Aegilops tauschii F775_07378 N 0.930
MLOC_4725 Hordeum vulgare MLOC_4725 N 0.930
Traes_4AL_A0565AC4C Triticum aestivum Traes_4AL_A0565AC4C N 0.930
Traes_5BL_B1F704307 Triticum aestivum Traes_5BL_B1F704307 N 0.930
Traes_5DL_8DC4CC983 Triticum aestivum Traes_5DL_8DC4CC983 N 0.930
TRIUR3_06257 Triticum urartu TRIUR3_06257 N 0.930
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N 0.746
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.730