estExt_gwp_gw1.C_280061 (Physcomitrella patens)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 estExt_gwp_gw1.C_280061 T324120_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_280061 Sigma 70 347 417

Links

Other Sigma 70 family TFs
Other Physcomitrella patens TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
53467 Aureococcus anophagefferens 53467 N 0.704
e_gw1.6.1215.1 Ostreococcus RCC809 e_gw1.6.1215.1 N 0.704
e_gw1.7.4.1 Physcomitrella patens e_gw1.7.4.1 N 0.944
estExt_fgenesh1_pg.C_280046 Physcomitrella patens estExt_fgenesh1_pg.C_280046 N 0.915
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.845
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.761
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.761