CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG06922
(
Caenorhabditis briggsae
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
CBG06922
T324404_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG06922
SMAD
7
110
AKKAIDNLMKKLIKHNKQALENLEFALRCQGQQKTECVTIPRSLDGRLQISHRKALPHVIYCRVYRWPDLQSHHELKAIEDCRFCYESGQKDICINPYHYKRVH
Links
Other
SMAD
family TFs
Other
Caenorhabditis briggsae
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
smad1
Danio rerio
ENSDARG00000027199
I
0.709
ENSGMOG00000007465
Gadus morhua
ENSGMOG00000007465
I
0.709
ENSLOCG00000008478
Lepisosteus oculatus
ENSLOCG00000008478
I
0.709
ENSONIG00000012614
Oreochromis niloticus
ENSONIG00000012614
I
0.709
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
0.840
RSKR_0000082500
Rhabditophanes kr3021
RSKR_0000082500
N
0.816
L893_g15060
Steinernema glaseri
L893_g15060
N
0.786
L898_g14583
Steinernema monticolum
L898_g14583
N
0.777
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
0.748
nAv.1.0.1.g05112
Acanthocheilonema viteae
nAv.1.0.1.g05112
N
0.845
NBR_0000271401
Nippostrongylus brasiliensis
NBR_0000271401
N
0.845
nLs.2.1.2.g02003
Litomosoides sigmodontis
nLs.2.1.2.g02003
N
0.845
nOo.2.0.1.g00974
Onchocerca ochengi
nOo.2.0.1.g00974
N
0.845
OFLC_0000052301
Onchocerca flexuosa
OFLC_0000052301
N
0.845
PTRK_0000297300
Parastrongyloides trichosuri
PTRK_0000297300
N
0.796
HCOI01543700
Haemonchus contortus
HCOI01543700
N
0.845
SMUV_0000477801
Syphacia muris
SMUV_0000477801
N
0.825
SPAL_0001290200
Strongyloides papillosus
SPAL_0001290200
N
0.816
SSTP_0000571600
Strongyloides stercoralis
SSTP_0000571600
N
0.816
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N
0.796
TCLT_0000791701
Thelazia callipaeda
TCLT_0000791701
N
0.835
L892_g4529
Steinernema scapterisci
L892_g4529
N
0.767
L596_g26009
Steinernema carpocapsae
L596_g26009
N
0.757
WUBG_02400
Wuchereria bancrofti
WUBG_02400
N
0.845
HCOI00251100
Haemonchus contortus
HCOI00251100
N
0.845
EVEC_0000636701
Enterobius vermicularis
EVEC_0000636701
N
0.825
EEL_0000068901
Elaeophora elaphi
EEL_0000068901
N
0.845
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
0.825
BXY_1512700
Bursaphelenchus xylophilus
BXY_1512700
N
0.786
BTMF_0000953701
Brugia timori
BTMF_0000953701
N
0.845
ASU_06962
Ascaris suum
ASU_06962
N
0.845
Minc06478
Meloidogyne incognita
Minc06478
N
0.757
WBGene00245189
Onchocerca volvulus
WBGene00245189
N
0.845
sma-2
Caenorhabditis elegans
WBGene00004856
N
1.000
LOAG_01471
Loa loa
LOAG_01471
N
0.835
CRE15772
Caenorhabditis remanei
CRE15772
N
1.000
Bm7459
Brugia malayi
Bm7459
N
0.845