CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0002664601
(
Heligmosomoides bakeri
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
HPBE_0002664601
T325727_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0002664601-mRNA-1
SMAD
5
71
FSKCSLRNCIWEREEGGALPHVIYCRVYRWPDLQSHHELKAIDSCRYCYDSGQKEICINPYHYRRIE
Links
Other
SMAD
family TFs
Other
Heligmosomoides bakeri
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
1.000
ANCCAN_07722
Ancylostoma caninum
ANCCAN_07722
N
0.746
ANCDUO_02619
Ancylostoma duodenale
ANCDUO_02619
N
0.746
ANCDUO_12670
Ancylostoma duodenale
ANCDUO_12670
N
0.746
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
0.716
HCOI00251100
Haemonchus contortus
HCOI00251100
N
0.761
HCOI01543700
Haemonchus contortus
HCOI01543700
N
0.761
HPLM_0002015601
Haemonchus placei
HPLM_0002015601
N
0.761
PTRK_0000297300
Parastrongyloides trichosuri
PTRK_0000297300
N
0.716
RSKR_0000082500
Rhabditophanes kr3021
RSKR_0000082500
N
0.701
SPAL_0001290200
Strongyloides papillosus
SPAL_0001290200
N
0.701
SSTP_0000571600
Strongyloides stercoralis
SSTP_0000571600
N
0.701
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N
0.701