CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ016883
(
Culex pipiens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
CpipJ_CPIJ016883
T326064_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ016883-RA
Sox
171
236
GKRRFTAYILWAKEARKQMMSNPDLDFASMSKRLGEMWANVPSNQKYNWKRRARRIAKKFKEGNDK
Links
Other
Sox
family TFs
Other
Culex pipiens
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MESCA011128
Megaselia scalaris
MESCA011128
N
0.466
PPAI008460
Phlebotomus papatasi
PPAI008460
N
0.448
LLOJ007360
Lutzomyia longipalpis
LLOJ007360
N
0.448
CLEC008450
Cimex lectularius
CLEC008450
N
0.497
Ocbimv22010533m.g
Octopus bimaculoides
Ocbimv22010533m.g
N
0.493
Cflo_06221--XP_392763.2_APIME
Camponotus floridanus
Cflo_06221--XP_392763.2_APIME
N
0.460
SPU_000793
Strongylocentrotus purpuratus
SPU_000793
N
0.000
SMAR009610
Strigamia maritima
SMAR009610
N
0.527
RPRC003655
Rhodnius prolixus
RPRC003655
N
0.507
NV16860
Nasonia vitripennis
NV16860
N
0.462
NV11063
Nasonia vitripennis
NV11063
N
0.479
L798_00141
Zootermopsis nevadensis
L798_00141
N
0.540
ISCW008318
Ixodes scapularis
ISCW008318
N
0.529
HMEL014563
Heliconius melpomene
HMEL014563
N
0.000
GB41882
Apis mellifera
GB41882
N
0.489
DAPPUDRAFT_236433
Daphnia pulex
DAPPUDRAFT_236433
N
0.427
CPIJ016883
Culex quinquefasciatus
CPIJ016883
N
0.741
CGI_10027966
Crassostrea gigas
CGI_10027966
N
0.442
CapteG128587
Capitella teleta
CapteG128587
N
0.512
BGIBMGA011184
Bombyx mori
BGIBMGA011184
N
0.000
ACEP17003
Atta cephalotes
ACEP17003
N
0.460