aug1.99_g20191 (Bigelowiella natans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 aug1.99_g20191 T326501_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_145483 Sox 77 145

Links

Other Sox family TFs
Other Bigelowiella natans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_20671 Phytophthora parasitica F443_20671 I 0.000
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.000
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I 0.000
PYU1_G002849 Pythium ultimum PYU1_G002849 I 0.000
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.000
PITG_14400 Phytophthora infestans PITG_14400 I 0.000
Physo132945 Phytophthora sojae Physo132945 I 0.000
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I 0.000
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I 0.000
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.000
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I 0.000
F443_20702 Phytophthora parasitica F443_20702 I 0.000
fgenesh_scip_prom.46568.9767 Phytophthora kernoviae fgenesh_scip_prom.46568.9767 N 0.000
F443_00625 Phytophthora parasitica F443_00625 N 0.000
Physo132965 Phytophthora sojae Physo132965 N 0.000
Physo138282 Phytophthora sojae Physo138282 N 0.000
PITG_10310 Phytophthora infestans PITG_10310 N 0.000
PITG_11562 Phytophthora infestans PITG_11562 N 0.000
fgenesh_scip_prom.46568.7328 Phytophthora kernoviae fgenesh_scip_prom.46568.7328 N 0.000
fgenesh_scip_prom.28083.3854 Phytophthora lateralis fgenesh_scip_prom.28083.3854 N 0.000
PYU1_G002839 Pythium ultimum PYU1_G002839 N 0.000
PYU1_G002847 Pythium ultimum PYU1_G002847 N 0.000
PYU1_G003097 Pythium ultimum PYU1_G003097 N 0.000
estExt_fgenesh1_kg.C_150093 Phytophthora capsici estExt_fgenesh1_kg.C_150093 N 0.000
estExt_fgenesh1_kg.C_2070034 Phytophthora capsici estExt_fgenesh1_kg.C_2070034 N 0.000
estExt_fgenesh1_pm.C_680840001 Phytophthora capsici estExt_fgenesh1_pm.C_680840001 N 0.000
F443_20672 Phytophthora parasitica F443_20672 N 0.000
HpaG811464 Hyaloperonospora arabidopsidis HpaG811464 N 0.000
maker-piw_contig_841-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_841-fgenesh-gene-0.2 N 0.000
HpaG809807 Hyaloperonospora arabidopsidis HpaG809807 N 0.000
maker-pir_contig_516-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.3 N 0.000
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N 0.000
maker-pir_contig_524-snap-gene-0.9 Pythium irregulare maker-pir_contig_524-snap-gene-0.9 N 0.000
maker-pir_contig_945-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_945-fgenesh-gene-0.0 N 0.000
maker-piw_contig_1647-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1647-snap-gene-0.3 N 0.000
fgenesh_scip_prom.46568.9768 Phytophthora kernoviae fgenesh_scip_prom.46568.9768 N 0.000
maker-piw_contig_637-snap-gene-0.12 Pythium iwayamai maker-piw_contig_637-snap-gene-0.12 N 0.000
Phyra85497 Phytophthora ramorum Phyra85497 N 0.000
maker-pve_contig_506-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_506-fgenesh-gene-0.3 N 0.000
maker-pve_contig_734-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_734-fgenesh-gene-0.2 N 0.000
maker-pve_contig_871-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_871-fgenesh-gene-0.0 N 0.000
Phyra73320 Phytophthora ramorum Phyra73320 N 0.000
Phyra80922 Phytophthora ramorum Phyra80922 N 0.000
Phyra80923 Phytophthora ramorum Phyra80923 N 0.000
Phyra80925 Phytophthora ramorum Phyra80925 N 0.000