CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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aug1.99_g20191
(
Bigelowiella natans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
aug1.99_g20191
T326501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
JGI_V11_145483
Sox
77
145
PKNPLSAYLFFVVKQRSEMSPSDSELDFREMAKKIGKTWRGMSKDEKQPYVQLAEYDKTRYEKEKRMYK
Links
Other
Sox
family TFs
Other
Bigelowiella natans
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.440
MBM_02410
Marssonina brunnea
MBM_02410
I
0.440
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.440
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.440
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.434
POPTR_0017s11460
Populus trichocarpa
POPTR_0017s11460
I
0.431
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.425
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.425
SapurV1A.0447s0140
Salix purpurea
SapurV1A.0447s0140
I
0.424