CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000005838
(
Ovis aries
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSOARG00000005838
T328573_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.605
0.609
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000006260
Sox
84
152
PRAPTTGYAIFLNEQRSQLRAQHPNLPFPEITKMLAAQWAQLPQEKKQRYVCEADEDKQRYIRELKAYQ
Links
Other
Sox
family TFs
Other
Ovis aries
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G077495
Zea mays
GRMZM2G077495
N
GRMZM2G311656
Zea mays
GRMZM2G311656
N
Sb01g033153
Sorghum bicolor
Sb01g033153
N
Sb01g033165
Sorghum bicolor
Sb01g033165
N
Si039632m.g
Setaria italica
Si039632m.g
N
Si040200m.g
Setaria italica
Si040200m.g
N
Pavir.J10886
Panicum virgatum
Pavir.J10886
N