HMG20A (Vicugna pacos)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSVPAG00000010013 T329379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.563 0.696
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000009316 Sox 103 171

Links

Other Sox family TFs
Other Vicugna pacos TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018332 Oryza indica BGIOSGA018332 N
OBART05G10920 Oryza barthii OBART05G10920 N
OGLUM05G11530 Oryza glumaepatula OGLUM05G11530 N
OMERI05G09610 Oryza meridionalis OMERI05G09610 N
ONIVA05G11290 Oryza nivara ONIVA05G11290 N
OPUNC05G09320 Oryza punctata OPUNC05G09320 N
ORGLA05G0094200 Oryza glaberrima ORGLA05G0094200 N
ORUFI05G11790 Oryza rufipogon ORUFI05G11790 N
Si023090m.g Setaria italica Si023090m.g N
Cucsa.095530 Cucumis sativus Cucsa.095530 N