CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_15083
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_15083
T330038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA23789
Sox
32
99
RSRAPNQYFIYRMAYIKQLRKIIGDNISMIRISPYISSSWSKEPPEVKEAYKRLSGQAENRLKEIRKS
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.618
GLOINDRAFT_14857
Rhizophagus irregularis
GLOINDRAFT_14857
N
0.447
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
0.585
GLOINDRAFT_17167
Rhizophagus irregularis
GLOINDRAFT_17167
N
0.526
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.422
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.559
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.432
GLOINDRAFT_30035
Rhizophagus irregularis
GLOINDRAFT_30035
N
0.572
GLOINDRAFT_30036
Rhizophagus irregularis
GLOINDRAFT_30036
N
0.510
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.428
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.437
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.577
GLOINDRAFT_33761
Rhizophagus irregularis
GLOINDRAFT_33761
N
0.572
GLOINDRAFT_34079
Rhizophagus irregularis
GLOINDRAFT_34079
N
0.572
GLOINDRAFT_349586
Rhizophagus irregularis
GLOINDRAFT_349586
N
0.418
GLOINDRAFT_9005
Rhizophagus irregularis
GLOINDRAFT_9005
N
0.456