CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_30036
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_30036
T330081_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA09876
Sox
37
104
KSKAPNRYLIYRLAFLKELRKRTDENVSMTKISSYISSMWFNETTSVRDAYEDLSKQVENRLTEIRQK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_30035
Rhizophagus irregularis
GLOINDRAFT_30035
N
0.672
GLOINDRAFT_33761
Rhizophagus irregularis
GLOINDRAFT_33761
N
0.639
GLOINDRAFT_34079
Rhizophagus irregularis
GLOINDRAFT_34079
N
0.625
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.573
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.541
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.510
GLOINDRAFT_9005
Rhizophagus irregularis
GLOINDRAFT_9005
N
0.505
GLOINDRAFT_17167
Rhizophagus irregularis
GLOINDRAFT_17167
N
0.500
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.461
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.454
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.446
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.442
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
0.438
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.415