CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_31849
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_31849
T330086_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA08317
Sox
39
113
TAKSPNAFFVYRKAFVNYLQICNHNLKMRDVSSMAGLSWKAASKEVKEAYKQIAREVERIIISQRQKRYKEYKNN
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_16563
Rhizophagus irregularis
GLOINDRAFT_16563
N
0.450
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.444
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.452
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.444
GLOINDRAFT_344841
Rhizophagus irregularis
GLOINDRAFT_344841
N
0.473
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.430
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.475