CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_344841
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_344841
T330135_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA17968
Sox
66
124
CSKSPNAFFVYRKAFVDQLSNFTGKNKLKMTEVSRLVSSRWKMESKQVKLAYEEIAKQV
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.661
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.529
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.489
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.485
GLOINDRAFT_5627
Rhizophagus irregularis
GLOINDRAFT_5627
N
0.485
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.480
GLOINDRAFT_21291
Rhizophagus irregularis
GLOINDRAFT_21291
N
0.474
GLOINDRAFT_31849
Rhizophagus irregularis
GLOINDRAFT_31849
N
0.473
GLOINDRAFT_3645
Rhizophagus irregularis
GLOINDRAFT_3645
N
0.466
Aqu1.227127
Amphimedon queenslandica
Aqu1.227127
N
0.452
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
0.445
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.442
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.436
DDB_G0279661
Dictyostelium discoideum
DDB_G0279661
N
0.428
AMAG_02414
Allomyces macrogynus
AMAG_02414
N
0.427
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.422
GLOINDRAFT_87134
Rhizophagus irregularis
GLOINDRAFT_87134
N
0.420
GLOINDRAFT_85283
Rhizophagus irregularis
GLOINDRAFT_85283
N
0.420
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.420
GLOINDRAFT_16563
Rhizophagus irregularis
GLOINDRAFT_16563
N
0.415