CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_33761
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_33761
T330116_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA06762
Sox
37
104
KSRAPNSYFIYRLAFLKELRKRTNDNVPMTKISSYISSMWFNETTAVRDAYKNLSEQVENRLTEIRRK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.504
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.572
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
0.473
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.570
GLOINDRAFT_30035
Rhizophagus irregularis
GLOINDRAFT_30035
N
0.708
GLOINDRAFT_30036
Rhizophagus irregularis
GLOINDRAFT_30036
N
0.639
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.485
GLOINDRAFT_34079
Rhizophagus irregularis
GLOINDRAFT_34079
N
0.667
GLOINDRAFT_36235
Rhizophagus irregularis
GLOINDRAFT_36235
N
0.451
GLOINDRAFT_9005
Rhizophagus irregularis
GLOINDRAFT_9005
N
0.499